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The map label for this gene is gidB

Identifier: 13473774

GI number: 13473774

Start: 3563066

End: 3563698

Strand: Reverse

Name: gidB

Synonym: mll4481

Alternate gene names: 13473774

Gene position: 3563698-3563066 (Counterclockwise)

Preceding gene: 13473775

Following gene: 13473773

Centisome position: 50.65

GC content: 61.77

Gene sequence:

>633_bases
GTGAGCTCTTTCTCCCTAGAGAGCCTGCAGGACGCGGCGGGTCCGGTTTCACGTGAAACATTCGATCGCCTGGTGGCGTT
CGAAGCCATGTTCCAGAAATGGAATCGCAGCATCAATCTGGTGGCGCAGTCGACCGCGGGCGATGTCTGGCAGCGCCACA
TCCTCGACAGCGCACAGCTGGCGCGCATAGAGCCCAATGCCACGCATTGGGTCGATATCGGTTCGGGCGGCGGATTTCCC
GGCCTGGTCATGGCTTTCCTGCTCGCCGAGCGTGCTGGGGCCAGCATCGATCTGGTGGAGTGCAATCGAAAAAAGGCATC
GTTCCTGCAAACCGTCATCGGCCAGTTCAACCTGCCGGCGCGGGTCGTGGCGCGCCGCATCAAGGACAGCCATGCGCTTG
TTCCGCAACCGCAAATCGTCACGGCACGGGCCCTGGCCTCGCTTTCGGTCCTGCTCGAGCTGACGGCACCCTGGTTGACA
TCAGGCGCGCGCGGCCTGTTCCACAAAGGCCGGGATTACCGCGCCGAAGTGCAAGAAAGCGTTAACCGATGGGCCTTCGA
TCTGGTAGAACATCCCAGTGTGACGGACCCCCATGGCGTCATCCTGGAACTGTCTAACCTGCGACCTGTCTGA

Upstream 100 bases:

>100_bases
CCATCGCCGACGCGCAGCGCATGGAGGGCATGACGCCGGCGGCATTGGCGATCATTGTCGCGCATGTCCGGCATTATGAG
AATGCGCAGAGAGACGTTGC

Downstream 100 bases:

>100_bases
TCTTCGACTTGTCGGGCTATTTGGCGACCCAAAATGAATTTCTGGCATAAACCCATGTTGAAAAACGGCCCCCGAATCAT
CACCGTAGCCAACCAGAAGG

Product: 16S rRNA methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MSSFSLESLQDAAGPVSRETFDRLVAFEAMFQKWNRSINLVAQSTAGDVWQRHILDSAQLARIEPNATHWVDIGSGGGFP
GLVMAFLLAERAGASIDLVECNRKKASFLQTVIGQFNLPARVVARRIKDSHALVPQPQIVTARALASLSVLLELTAPWLT
SGARGLFHKGRDYRAEVQESVNRWAFDLVEHPSVTDPHGVILELSNLRPV

Sequences:

>Translated_210_residues
MSSFSLESLQDAAGPVSRETFDRLVAFEAMFQKWNRSINLVAQSTAGDVWQRHILDSAQLARIEPNATHWVDIGSGGGFP
GLVMAFLLAERAGASIDLVECNRKKASFLQTVIGQFNLPARVVARRIKDSHALVPQPQIVTARALASLSVLLELTAPWLT
SGARGLFHKGRDYRAEVQESVNRWAFDLVEHPSVTDPHGVILELSNLRPV
>Mature_209_residues
SSFSLESLQDAAGPVSRETFDRLVAFEAMFQKWNRSINLVAQSTAGDVWQRHILDSAQLARIEPNATHWVDIGSGGGFPG
LVMAFLLAERAGASIDLVECNRKKASFLQTVIGQFNLPARVVARRIKDSHALVPQPQIVTARALASLSVLLELTAPWLTS
GARGLFHKGRDYRAEVQESVNRWAFDLVEHPSVTDPHGVILELSNLRPV

Specific function: Specifically methylates the N7 position of guanosine in position 527 of 16S rRNA

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMG_RHILO (Q98DZ2)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_105342.1
- ProteinModelPortal:   Q98DZ2
- SMR:   Q98DZ2
- GeneID:   1228003
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mll4481
- NMPDR:   fig|266835.1.peg.3446
- HOGENOM:   HBG686577
- OMA:   GGQGWIV
- ProtClustDB:   PRK00107
- GO:   GO:0005737
- HAMAP:   MF_00074
- InterPro:   IPR003682
- PIRSF:   PIRSF003078
- TIGRFAMs:   TIGR00138

Pfam domain/function: PF02527 GidB

EC number: =2.1.1.170

Molecular weight: Translated: 23108; Mature: 22976

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFSLESLQDAAGPVSRETFDRLVAFEAMFQKWNRSINLVAQSTAGDVWQRHILDSAQL
CCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHCCHHH
ARIEPNATHWVDIGSGGGFPGLVMAFLLAERAGASIDLVECNRKKASFLQTVIGQFNLPA
EEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCH
RVVARRIKDSHALVPQPQIVTARALASLSVLLELTAPWLTSGARGLFHKGRDYRAEVQES
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHH
VNRWAFDLVEHPSVTDPHGVILELSNLRPV
HHHHHHHHHCCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure 
SSFSLESLQDAAGPVSRETFDRLVAFEAMFQKWNRSINLVAQSTAGDVWQRHILDSAQL
CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHCCHHH
ARIEPNATHWVDIGSGGGFPGLVMAFLLAERAGASIDLVECNRKKASFLQTVIGQFNLPA
EEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCH
RVVARRIKDSHALVPQPQIVTARALASLSVLLELTAPWLTSGARGLFHKGRDYRAEVQES
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHH
VNRWAFDLVEHPSVTDPHGVILELSNLRPV
HHHHHHHHHCCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968