| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is mnmG
Identifier: 13473775
GI number: 13473775
Start: 3563695
End: 3565566
Strand: Reverse
Name: mnmG
Synonym: mll4482
Alternate gene names: 13473775
Gene position: 3565566-3563695 (Counterclockwise)
Preceding gene: 13473776
Following gene: 13473774
Centisome position: 50.68
GC content: 64.8
Gene sequence:
>1872_bases ATGACCGATCACTATGATGTGGTTGTGGTGGGCGGCGGCCATGCGGGATGCGAGGCGGCCAGTGCCGCCGCGCGCGCCGG CGCAAAAACCGCGCTGGTGACGCTGCGCTTCGATACGATCGGCGTGATGTCGTGCAATCCGGCGATTGGCGGGCTCGGTA AGGGCCATCTGGTCCGCGAGATCGACGCCATGGACGGGCTGATGGGTCGGGTGGCGGATGCCGCCGGGATCCAGTTCCGT CTGCTCAACCGCCGCAAGGGTCCGGCGGTGCGCGGGCCACGCACGCAGGCCGATCGAAAGCTCTATCGCCTTGCTATGCA GGAAGCGATTCGGCAGCAGAACGATCTCGACGTGGTCGAGGGCGAGGTGCTGGATTTCGAGATCAACGAAGGACGGATCA CTGCTGTCCTCCTGGCCGGCGGCCGGAGGCTTGCCTGCGGCGCCGTGGTCCTGACGACAGGCACTTTCCTGCGCGGCCTC ATTCATATTGGCGAGAAGAAGATCGTCGCCGGCCGCATGAACGAGCAGGCGAGCCTTGGTCTGTCGGCGACCATGGACCG CGCCGGCTTCAAGCTCGGCCGCCTGAAGACCGGCACGCCACCGCGGCTGGATGGAAAGACCATCGACTGGGCGTCGCTGG AAAGCCAGGCTGCGGACGAGGATCCGGTGCCGTTCTCACTGATGAGCGACCGCATCACCACACCGCAGATCGAGTGCGGC ATCACGCGCACGACATCAGCCACACATGAGCTGATCCGCGCCAATCTCGGGCGCTCCGCCATGTATTCCGGATCGATCGA AGGCGTCGGGCCGCGCTATTGCCCGTCGATCGAGGACAAGATCGTCAAGTTCGGCGACCGCGACGGCCACCAGATCTTTC TCGAGCCAGAGGGGCTCGACGACGACACGGTCTATCCCAATGGGATTTCGACCTCGCTGCCGCAGGATGTGCAGCTCGAG ATCCTTAAGACAATTCCGGGGCTGGAGCGCGCGACCATGCTGCAGCCCGGCTATGCTATCGAGTATGATCATGTCGATCC GCGCGAGCTGCATCAGACGCTGGAGACCAAGCGCATCGCTGGCCTCTTTCTCGCTGGGCAGATCAACGGCACCACGGGCT ATGAGGAGGCGGCTGGCCAGGGCTTGCTCGCTGGCCTCAACGCGGCGCGGCGGGCAGCGGGCGGCGAGCAGATCGTGCTG AGCCGCACCGAGGCCTATATCGGCGTGATGGTCGACGATTTGACCAGCCGCGGCATCAGCGAACCCTACCGCATGTTCAC CTCGCGCGCCGAATTCCGGCTGTCATTGCGCGCCGACAATGCCGATGAACGGCTGACGCCGCTTGCCGCGAAGCTGGGGA TCGCCTCGGTGCAGCGGATGCAGCGCTATGGCGATGTCATGCAGCGGCTCGACGCGGCGCGCGAATTGGCCAGATCGGTG GCGATGACCCCGAATGAGGCGGCGCGGCAAGGGCTGGAGATCAACCGGGACGGCGTGCGCCGGTCGGGTTATGAGCTGCT GGCCTATCCCGACGTCGATGTCGCCTGGCTGGCCAGGGTCGAGCCAAAATTTGCGGCGATCGACGCCAAGACCGCGGAAC GTCTCGAAACGGAAGCGAAATATTCGGTCTATCTCGACCGGCAGAAGAGCGATGTCGCGCAGATCCGCCACGAGGAGAGC CGGCTGATCCCCGAGACGGTCGATTTCGCAGGTGTGCCGGGCCTGTCCAATGAATTGAAACAGAAGATGCAGGCGCGGCG GCCGCGGTCCATCGCCGACGCGCAGCGCATGGAGGGCATGACGCCGGCGGCATTGGCGATCATTGTCGCGCATGTCCGGC ATTATGAGAATGCGCAGAGAGACGTTGCGTGA
Upstream 100 bases:
>100_bases TCACCCCTGTTTCACGTGAAACTTGCCGCGAAGTTTTCTTGACAGCTTGGCCCTGCGGGGACATGTGTCCCTCAATCGCT TTTTGAGTCCAGGATTTGAA
Downstream 100 bases:
>100_bases GCTCTTTCTCCCTAGAGAGCCTGCAGGACGCGGCGGGTCCGGTTTCACGTGAAACATTCGATCGCCTGGTGGCGTTCGAA GCCATGTTCCAGAAATGGAA
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A
Number of amino acids: Translated: 623; Mature: 622
Protein sequence:
>623_residues MTDHYDVVVVGGGHAGCEAASAAARAGAKTALVTLRFDTIGVMSCNPAIGGLGKGHLVREIDAMDGLMGRVADAAGIQFR LLNRRKGPAVRGPRTQADRKLYRLAMQEAIRQQNDLDVVEGEVLDFEINEGRITAVLLAGGRRLACGAVVLTTGTFLRGL IHIGEKKIVAGRMNEQASLGLSATMDRAGFKLGRLKTGTPPRLDGKTIDWASLESQAADEDPVPFSLMSDRITTPQIECG ITRTTSATHELIRANLGRSAMYSGSIEGVGPRYCPSIEDKIVKFGDRDGHQIFLEPEGLDDDTVYPNGISTSLPQDVQLE ILKTIPGLERATMLQPGYAIEYDHVDPRELHQTLETKRIAGLFLAGQINGTTGYEEAAGQGLLAGLNAARRAAGGEQIVL SRTEAYIGVMVDDLTSRGISEPYRMFTSRAEFRLSLRADNADERLTPLAAKLGIASVQRMQRYGDVMQRLDAARELARSV AMTPNEAARQGLEINRDGVRRSGYELLAYPDVDVAWLARVEPKFAAIDAKTAERLETEAKYSVYLDRQKSDVAQIRHEES RLIPETVDFAGVPGLSNELKQKMQARRPRSIADAQRMEGMTPAALAIIVAHVRHYENAQRDVA
Sequences:
>Translated_623_residues MTDHYDVVVVGGGHAGCEAASAAARAGAKTALVTLRFDTIGVMSCNPAIGGLGKGHLVREIDAMDGLMGRVADAAGIQFR LLNRRKGPAVRGPRTQADRKLYRLAMQEAIRQQNDLDVVEGEVLDFEINEGRITAVLLAGGRRLACGAVVLTTGTFLRGL IHIGEKKIVAGRMNEQASLGLSATMDRAGFKLGRLKTGTPPRLDGKTIDWASLESQAADEDPVPFSLMSDRITTPQIECG ITRTTSATHELIRANLGRSAMYSGSIEGVGPRYCPSIEDKIVKFGDRDGHQIFLEPEGLDDDTVYPNGISTSLPQDVQLE ILKTIPGLERATMLQPGYAIEYDHVDPRELHQTLETKRIAGLFLAGQINGTTGYEEAAGQGLLAGLNAARRAAGGEQIVL SRTEAYIGVMVDDLTSRGISEPYRMFTSRAEFRLSLRADNADERLTPLAAKLGIASVQRMQRYGDVMQRLDAARELARSV AMTPNEAARQGLEINRDGVRRSGYELLAYPDVDVAWLARVEPKFAAIDAKTAERLETEAKYSVYLDRQKSDVAQIRHEES RLIPETVDFAGVPGLSNELKQKMQARRPRSIADAQRMEGMTPAALAIIVAHVRHYENAQRDVA >Mature_622_residues TDHYDVVVVGGGHAGCEAASAAARAGAKTALVTLRFDTIGVMSCNPAIGGLGKGHLVREIDAMDGLMGRVADAAGIQFRL LNRRKGPAVRGPRTQADRKLYRLAMQEAIRQQNDLDVVEGEVLDFEINEGRITAVLLAGGRRLACGAVVLTTGTFLRGLI HIGEKKIVAGRMNEQASLGLSATMDRAGFKLGRLKTGTPPRLDGKTIDWASLESQAADEDPVPFSLMSDRITTPQIECGI TRTTSATHELIRANLGRSAMYSGSIEGVGPRYCPSIEDKIVKFGDRDGHQIFLEPEGLDDDTVYPNGISTSLPQDVQLEI LKTIPGLERATMLQPGYAIEYDHVDPRELHQTLETKRIAGLFLAGQINGTTGYEEAAGQGLLAGLNAARRAAGGEQIVLS RTEAYIGVMVDDLTSRGISEPYRMFTSRAEFRLSLRADNADERLTPLAAKLGIASVQRMQRYGDVMQRLDAARELARSVA MTPNEAARQGLEINRDGVRRSGYELLAYPDVDVAWLARVEPKFAAIDAKTAERLETEAKYSVYLDRQKSDVAQIRHEESR LIPETVDFAGVPGLSNELKQKMQARRPRSIADAQRMEGMTPAALAIIVAHVRHYENAQRDVA
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family
Homologues:
Organism=Homo sapiens, GI74024895, Length=639, Percent_Identity=43.8184663536776, Blast_Score=514, Evalue=1e-145, Organism=Homo sapiens, GI19882217, Length=664, Percent_Identity=42.1686746987952, Blast_Score=499, Evalue=1e-141, Organism=Homo sapiens, GI183227703, Length=679, Percent_Identity=41.2371134020619, Blast_Score=494, Evalue=1e-140, Organism=Escherichia coli, GI2367273, Length=619, Percent_Identity=49.7576736672052, Blast_Score=593, Evalue=1e-170, Organism=Caenorhabditis elegans, GI17534255, Length=618, Percent_Identity=42.8802588996764, Blast_Score=498, Evalue=1e-141, Organism=Saccharomyces cerevisiae, GI6321202, Length=622, Percent_Identity=45.9807073954984, Blast_Score=554, Evalue=1e-158, Organism=Drosophila melanogaster, GI24658174, Length=636, Percent_Identity=46.8553459119497, Blast_Score=545, Evalue=1e-155,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MNMG_RHILO (Q98DZ1)
Other databases:
- EMBL: BA000012 - RefSeq: NP_105343.1 - ProteinModelPortal: Q98DZ1 - SMR: Q98DZ1 - GeneID: 1228004 - GenomeReviews: BA000012_GR - KEGG: mlo:mll4482 - NMPDR: fig|266835.1.peg.3447 - HOGENOM: HBG284774 - OMA: GIQFRVL - ProtClustDB: PRK05192 - GO: GO:0005737 - HAMAP: MF_00129 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - TIGRFAMs: TIGR00136
Pfam domain/function: PF01134 GIDA
EC number: NA
Molecular weight: Translated: 67827; Mature: 67696
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2
Important sites: BINDING 123-123 BINDING 178-178 BINDING 367-367
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDHYDVVVVGGGHAGCEAASAAARAGAKTALVTLRFDTIGVMSCNPAIGGLGKGHLVRE CCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEECEEEEEECCCCCCCCCCCHHHHH IDAMDGLMGRVADAAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQEAIRQQNDLDVVE HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEC GEVLDFEINEGRITAVLLAGGRRLACGAVVLTTGTFLRGLIHIGEKKIVAGRMNEQASLG CEEEEEEECCCEEEEEEEECCCEEECCEEEEHHHHHHHHHHHHCCCEEEECCCCCHHHCC LSATMDRAGFKLGRLKTGTPPRLDGKTIDWASLESQAADEDPVPFSLMSDRITTPQIECG CHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHCCCCCCCEEEC ITRTTSATHELIRANLGRSAMYSGSIEGVGPRYCPSIEDKIVKFGDRDGHQIFLEPEGLD CEECCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCC DDTVYPNGISTSLPQDVQLEILKTIPGLERATMLQPGYAIEYDHVDPRELHQTLETKRIA CCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHEECCCCEEEECCCCHHHHHHHHHHHHHH GLFLAGQINGTTGYEEAAGQGLLAGLNAARRAAGGEQIVLSRTEAYIGVMVDDLTSRGIS EEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCEEEHEEHHHHHCCCC EPYRMFTSRAEFRLSLRADNADERLTPLAAKLGIASVQRMQRYGDVMQRLDAARELARSV HHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMTPNEAARQGLEINRDGVRRSGYELLAYPDVDVAWLARVEPKFAAIDAKTAERLETEAK CCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHEECCCCCEEECHHHHHHHHHCCE YSVYLDRQKSDVAQIRHEESRLIPETVDFAGVPGLSNELKQKMQARRPRSIADAQRMEGM EEEEEECCHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCC TPAALAIIVAHVRHYENAQRDVA CHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDHYDVVVVGGGHAGCEAASAAARAGAKTALVTLRFDTIGVMSCNPAIGGLGKGHLVRE CCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEECEEEEEECCCCCCCCCCCHHHHH IDAMDGLMGRVADAAGIQFRLLNRRKGPAVRGPRTQADRKLYRLAMQEAIRQQNDLDVVE HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEC GEVLDFEINEGRITAVLLAGGRRLACGAVVLTTGTFLRGLIHIGEKKIVAGRMNEQASLG CEEEEEEECCCEEEEEEEECCCEEECCEEEEHHHHHHHHHHHHCCCEEEECCCCCHHHCC LSATMDRAGFKLGRLKTGTPPRLDGKTIDWASLESQAADEDPVPFSLMSDRITTPQIECG CHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHCCCCCCCEEEC ITRTTSATHELIRANLGRSAMYSGSIEGVGPRYCPSIEDKIVKFGDRDGHQIFLEPEGLD CEECCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCC DDTVYPNGISTSLPQDVQLEILKTIPGLERATMLQPGYAIEYDHVDPRELHQTLETKRIA CCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHEECCCCEEEECCCCHHHHHHHHHHHHHH GLFLAGQINGTTGYEEAAGQGLLAGLNAARRAAGGEQIVLSRTEAYIGVMVDDLTSRGIS EEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCEEEHEEHHHHHCCCC EPYRMFTSRAEFRLSLRADNADERLTPLAAKLGIASVQRMQRYGDVMQRLDAARELARSV HHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMTPNEAARQGLEINRDGVRRSGYELLAYPDVDVAWLARVEPKFAAIDAKTAERLETEAK CCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHEECCCCCEEECHHHHHHHHHCCE YSVYLDRQKSDVAQIRHEESRLIPETVDFAGVPGLSNELKQKMQARRPRSIADAQRMEGM EEEEEECCHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCC TPAALAIIVAHVRHYENAQRDVA CHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11214968