| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473759
Identifier: 13473759
GI number: 13473759
Start: 3546598
End: 3547203
Strand: Direct
Name: 13473759
Synonym: mlr4460
Alternate gene names: NA
Gene position: 3546598-3547203 (Clockwise)
Preceding gene: 13473758
Following gene: 13473760
Centisome position: 50.41
GC content: 63.2
Gene sequence:
>606_bases ATGAAAGACCTTTTTCGGAAAACCACCGGTATCTTGCCCGCTCTCGCCGTCGCGGCGTGCCTGGGCACGACAGCCCTCCT GGCTCCGGTGCTTGGCAGCCTGCCGGCCTCGGCCGCCGAGAAGCCCATCCAGCCGGAGAAGAACCCGCCGGGCGACATCC CCGATTCGCAGGTCTTCATCGACTACACCTCGCCGCTAGGGTTCACCCTGAAGGTGCCGGAAGGCTGGGCACGGTCGGAC CGTGCCGACGGCGCAAGCTTCGTCGACAAGTTGGATGGCGTCGCGGTCACGGTTTCCAAGGCGGACGCCGCGCCCACTGT CGACAGCGCCAAAGCGGACTATGTCGCCAAGCTCGAGGCGGCCGGGCGTGCTGTGAAGGTCAGCGCGGTCAAGCAGGTCA AGCTGCCGGCCGGTACCGCGATCCGCATCGTCTACACATCGAACTCCGAGCCGAACGCGGTAACCAACCGGCAGGTTCGC CTCGAAAACGAACGCTACCTCTATTTCAAGGACGGCAAGCTCGTTGCGCTCGAACTTTATGCACCCAAGGGCGCCGACAA TGTCGATCAATGGCAATTGATGTCCAACTCGTTCCGGTGGAAGTGA
Upstream 100 bases:
>100_bases GCGCCAATAGCTTACGAAAGGGTATGAGGCCGGCGACCCGCCCGTAAGCTTGCAGCGGCATAATGAATGGACCCAACCGT CCATCGAAAGGCTGCGGAAA
Downstream 100 bases:
>100_bases GATGCACGCGCTGGACGCGCATGAGATCTATCGCTTTTTCCATATAGGCGACGACGAGACGGCCGCCTTGCGAGGCGTCA GTTTCCACATCGCCGCAGGC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MKDLFRKTTGILPALAVAACLGTTALLAPVLGSLPASAAEKPIQPEKNPPGDIPDSQVFIDYTSPLGFTLKVPEGWARSD RADGASFVDKLDGVAVTVSKADAAPTVDSAKADYVAKLEAAGRAVKVSAVKQVKLPAGTAIRIVYTSNSEPNAVTNRQVR LENERYLYFKDGKLVALELYAPKGADNVDQWQLMSNSFRWK
Sequences:
>Translated_201_residues MKDLFRKTTGILPALAVAACLGTTALLAPVLGSLPASAAEKPIQPEKNPPGDIPDSQVFIDYTSPLGFTLKVPEGWARSD RADGASFVDKLDGVAVTVSKADAAPTVDSAKADYVAKLEAAGRAVKVSAVKQVKLPAGTAIRIVYTSNSEPNAVTNRQVR LENERYLYFKDGKLVALELYAPKGADNVDQWQLMSNSFRWK >Mature_201_residues MKDLFRKTTGILPALAVAACLGTTALLAPVLGSLPASAAEKPIQPEKNPPGDIPDSQVFIDYTSPLGFTLKVPEGWARSD RADGASFVDKLDGVAVTVSKADAAPTVDSAKADYVAKLEAAGRAVKVSAVKQVKLPAGTAIRIVYTSNSEPNAVTNRQVR LENERYLYFKDGKLVALELYAPKGADNVDQWQLMSNSFRWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21535; Mature: 21535
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDLFRKTTGILPALAVAACLGTTALLAPVLGSLPASAAEKPIQPEKNPPGDIPDSQVFI CHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEE DYTSPLGFTLKVPEGWARSDRADGASFVDKLDGVAVTVSKADAAPTVDSAKADYVAKLEA EECCCCCEEEECCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHH AGRAVKVSAVKQVKLPAGTAIRIVYTSNSEPNAVTNRQVRLENERYLYFKDGKLVALELY CCCEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEECCCEEEEEECCCEEEEEEE APKGADNVDQWQLMSNSFRWK CCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure MKDLFRKTTGILPALAVAACLGTTALLAPVLGSLPASAAEKPIQPEKNPPGDIPDSQVFI CHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEE DYTSPLGFTLKVPEGWARSDRADGASFVDKLDGVAVTVSKADAAPTVDSAKADYVAKLEA EECCCCCEEEECCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHH AGRAVKVSAVKQVKLPAGTAIRIVYTSNSEPNAVTNRQVRLENERYLYFKDGKLVALELY CCCEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEECCCEEEEEECCCEEEEEEE APKGADNVDQWQLMSNSFRWK CCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA