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The map label for this gene is 13473745

Identifier: 13473745

GI number: 13473745

Start: 3521599

End: 3522135

Strand: Reverse

Name: 13473745

Synonym: mll4443

Alternate gene names: NA

Gene position: 3522135-3521599 (Counterclockwise)

Preceding gene: 13473746

Following gene: 13473744

Centisome position: 50.06

GC content: 56.8

Gene sequence:

>537_bases
GTGAGGCGCAGCAGACAGAGGTGGTTTATGGCGGAACCCTTTCTCTCCGAGATCAGAATAATGTCCTTCGGATTCCCTCC
CAAAGGGTGGGCTTTTTGCGACGGACAATTGTTGCCGATCAACCAAAATCAGGGATTGTTTTCGTTGCTTGGAACGACGT
ATGGCGGCGACGGGCGAGTCACCTTTGGACTTCCCGACCTGCGCGGTCGCGTGCCGAACCATATCGGGGGTAGCGGGCAC
TCCCTCGGAGAGCGTGGCGGCGAACAGGCGCATACGCTTTCAATCGCCGAGATACCCACCCATCTCCATACCTTGAATGG
ATCGACAACCCAGTCGACGACTATTTCGCCGGATACGAACACGGTCCTTTCGGGGTCGACCCCACAAAACATCTATGCAG
GTGCCGCCCACCTTGTGGCAATGGCACCGAACGCCATTGCGAATGTCGGCGGAAGCCAGGCGCATCTCAACATGCAACCA
TTCCTGGTGCTCAACTTCTGTATCGCCTTGCAGGGCATCTTCCCCTCGCAGAATTGA

Upstream 100 bases:

>100_bases
GCTCCCAGTTGTTCACCTGCAACGGCGGCAACAGTAAATTTCAAGAAATTTCGGCTTCAGCGGTCAAAAGTAGATTGTGT
TTCGTAGAACATGACGTAAG

Downstream 100 bases:

>100_bases
CGGAGACGCGTCGTGGCACAGCCTTACATTGGCGAGATCCGAATGTTTGCCGGCAATTTCGCGCCTGCCGGCTGGATGTT
TTGCGAAGGACAGCTCCTGC

Product: microcystin dependent protein MdpB

Products: NA

Alternate protein names: Phage Tail Collar; Tail Collar Domain-Containing Protein; Phage Tail Collar Domain-Containing Protein; Microcystin Dependent Protein; Microcystin-Dependent Protein; Phage Tail Collar Domain Protein; Phage Tail Collar Domain Family; Microcystin Dependent Protein MdpB; Microcystin Dependent; Phenylacrylic Acid Decarboxylase; Cell Wall/Surface Repeat Protein

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MRRSRQRWFMAEPFLSEIRIMSFGFPPKGWAFCDGQLLPINQNQGLFSLLGTTYGGDGRVTFGLPDLRGRVPNHIGGSGH
SLGERGGEQAHTLSIAEIPTHLHTLNGSTTQSTTISPDTNTVLSGSTPQNIYAGAAHLVAMAPNAIANVGGSQAHLNMQP
FLVLNFCIALQGIFPSQN

Sequences:

>Translated_178_residues
MRRSRQRWFMAEPFLSEIRIMSFGFPPKGWAFCDGQLLPINQNQGLFSLLGTTYGGDGRVTFGLPDLRGRVPNHIGGSGH
SLGERGGEQAHTLSIAEIPTHLHTLNGSTTQSTTISPDTNTVLSGSTPQNIYAGAAHLVAMAPNAIANVGGSQAHLNMQP
FLVLNFCIALQGIFPSQN
>Mature_178_residues
MRRSRQRWFMAEPFLSEIRIMSFGFPPKGWAFCDGQLLPINQNQGLFSLLGTTYGGDGRVTFGLPDLRGRVPNHIGGSGH
SLGERGGEQAHTLSIAEIPTHLHTLNGSTTQSTTISPDTNTVLSGSTPQNIYAGAAHLVAMAPNAIANVGGSQAHLNMQP
FLVLNFCIALQGIFPSQN

Specific function: Unknown

COG id: COG4675

COG function: function code S; Microcystin-dependent protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19070; Mature: 19070

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSRQRWFMAEPFLSEIRIMSFGFPPKGWAFCDGQLLPINQNQGLFSLLGTTYGGDGRV
CCCCCCCEEECCHHHHHEEEEECCCCCCCCEEECCEEEECCCCCCHHEEECCCCCCCCEE
TFGLPDLRGRVPNHIGGSGHSLGERGGEQAHTLSIAEIPTHLHTLNGSTTQSTTISPDTN
EECCCHHHCCCCCCCCCCCCCHHHCCCCCCEEEEHHHCCCEEEECCCCCCCCEEECCCCC
TVLSGSTPQNIYAGAAHLVAMAPNAIANVGGSQAHLNMQPFLVLNFCIALQGIFPSQN
EEECCCCCCHHHHHHHHHHHCCCHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRRSRQRWFMAEPFLSEIRIMSFGFPPKGWAFCDGQLLPINQNQGLFSLLGTTYGGDGRV
CCCCCCCEEECCHHHHHEEEEECCCCCCCCEEECCEEEECCCCCCHHEEECCCCCCCCEE
TFGLPDLRGRVPNHIGGSGHSLGERGGEQAHTLSIAEIPTHLHTLNGSTTQSTTISPDTN
EECCCHHHCCCCCCCCCCCCCHHHCCCCCCEEEEHHHCCCEEEECCCCCCCCEEECCCCC
TVLSGSTPQNIYAGAAHLVAMAPNAIANVGGSQAHLNMQPFLVLNFCIALQGIFPSQN
EEECCCCCCHHHHHHHHHHHCCCHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA