Click here to switch to the map view.

The map label for this gene is 13473744

Identifier: 13473744

GI number: 13473744

Start: 3521077

End: 3521586

Strand: Reverse

Name: 13473744

Synonym: mll4442

Alternate gene names: NA

Gene position: 3521586-3521077 (Counterclockwise)

Preceding gene: 13473745

Following gene: 13473743

Centisome position: 50.05

GC content: 59.22

Gene sequence:

>510_bases
GTGGCACAGCCTTACATTGGCGAGATCCGAATGTTTGCCGGCAATTTCGCGCCTGCCGGCTGGATGTTTTGCGAAGGACA
GCTCCTGCCGATTTCAGAATATGAGACGCTGTTCCAACTGATCGGCACCACCTATGGCGGCGATGGCCAGAGCACCTTTG
CATTGCCTGATCTGCGTGGCCGCGTTCCGATCCATCAGGGTGGTGGCTTCGTCTTGGCCGAAACCGGCGGGGTGGAAGAG
GTCACGCTTACCGTCGCGCAAATCCCTGCGCACTCGCATCCCTTGCTGGCAACGAACGACTTCGCCACCACAACAGCCGT
CCAAAACAATGTGCCGGCGGCGGCAAGCGTCGTGAACATTGACGCTTACGGCACCGACCAGCCGACTACGCCCGTCAGTG
TTCAGTCGATATCCGCGACCGGCGGCAGCCAGCCACACAGCAATTTCCAGCCGTATCTGTGCGTGGACTTCATCATCTCG
CTCTTCGGCATATTCCCGTCACAGACCTGA

Upstream 100 bases:

>100_bases
CGGAAGCCAGGCGCATCTCAACATGCAACCATTCCTGGTGCTCAACTTCTGTATCGCCTTGCAGGGCATCTTCCCCTCGC
AGAATTGACGGAGACGCGTC

Downstream 100 bases:

>100_bases
GAGGACGCCATGGCCGATCCGTTCGTCGCAGAAATCCGGATTTTCCCGTTCAATTTTGCGCCCAAGGGCTGGGCGTTCTG
CGACGGGCAAATCTTGCCAA

Product: microcystin dependent protein MdpB

Products: NA

Alternate protein names: Phage Tail Collar; Phage Tail Collar Domain-Containing Protein; Tail Collar Domain-Containing Protein; Microcystin Dependent Protein; Microcystin-Dependent Protein; Phage Tail Collar Domain Protein; Phage Tail Collar Domain Family; Microcystin Dependent Protein MdpB; Cell Wall/Surface Repeat Protein; Phage Tail Collar Domain; Microcystin-Dependent Protein-Like Protein; Microcystin Dependent; Phenylacrylic Acid Decarboxylase

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MAQPYIGEIRMFAGNFAPAGWMFCEGQLLPISEYETLFQLIGTTYGGDGQSTFALPDLRGRVPIHQGGGFVLAETGGVEE
VTLTVAQIPAHSHPLLATNDFATTTAVQNNVPAAASVVNIDAYGTDQPTTPVSVQSISATGGSQPHSNFQPYLCVDFIIS
LFGIFPSQT

Sequences:

>Translated_169_residues
MAQPYIGEIRMFAGNFAPAGWMFCEGQLLPISEYETLFQLIGTTYGGDGQSTFALPDLRGRVPIHQGGGFVLAETGGVEE
VTLTVAQIPAHSHPLLATNDFATTTAVQNNVPAAASVVNIDAYGTDQPTTPVSVQSISATGGSQPHSNFQPYLCVDFIIS
LFGIFPSQT
>Mature_168_residues
AQPYIGEIRMFAGNFAPAGWMFCEGQLLPISEYETLFQLIGTTYGGDGQSTFALPDLRGRVPIHQGGGFVLAETGGVEEV
TLTVAQIPAHSHPLLATNDFATTTAVQNNVPAAASVVNIDAYGTDQPTTPVSVQSISATGGSQPHSNFQPYLCVDFIISL
FGIFPSQT

Specific function: Unknown

COG id: COG4675

COG function: function code S; Microcystin-dependent protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17867; Mature: 17736

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQPYIGEIRMFAGNFAPAGWMFCEGQLLPISEYETLFQLIGTTYGGDGQSTFALPDLRG
CCCCCCCCEEEEECCCCCCCEEEECCEEEEHHHHHHHHHHHHCCCCCCCCCEEECCCCCC
RVPIHQGGGFVLAETGGVEEVTLTVAQIPAHSHPLLATNDFATTTAVQNNVPAAASVVNI
CCEEECCCCEEEEECCCCCEEEEEEEECCCCCCCEEEECCCCEEEEECCCCCCCEEEEEE
DAYGTDQPTTPVSVQSISATGGSQPHSNFQPYLCVDFIISLFGIFPSQT
ECCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AQPYIGEIRMFAGNFAPAGWMFCEGQLLPISEYETLFQLIGTTYGGDGQSTFALPDLRG
CCCCCCCEEEEECCCCCCCEEEECCEEEEHHHHHHHHHHHHCCCCCCCCCEEECCCCCC
RVPIHQGGGFVLAETGGVEEVTLTVAQIPAHSHPLLATNDFATTTAVQNNVPAAASVVNI
CCEEECCCCEEEEECCCCCEEEEEEEECCCCCCCEEEECCCCEEEEECCCCCCCEEEEEE
DAYGTDQPTTPVSVQSISATGGSQPHSNFQPYLCVDFIISLFGIFPSQT
ECCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA