| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473739
Identifier: 13473739
GI number: 13473739
Start: 3518015
End: 3518803
Strand: Reverse
Name: 13473739
Synonym: mll4437
Alternate gene names: NA
Gene position: 3518803-3518015 (Counterclockwise)
Preceding gene: 13473742
Following gene: 13473737
Centisome position: 50.01
GC content: 65.91
Gene sequence:
>789_bases ATGGCTGATATCGGGGCAAAGACGGAAGCGGCGCCTGCGGACGCGGCCATGCCGCTGTTCTATTCCAGGCCCGAAGCGCT CAACCCGGTACGGCACGGCTCGCTGGGCCTGACCGCGCGCGGCGACTTTGCTTTCGCGCGCACGGCGCACGCCATTCCGG TGGTGGCGTCGGAAATGCCGGCGGCGATGCGCTCCTACCCGATCGTCTTCATCGGCCCGGCCAAATCCCCTGTCATCATC ACCGGCGTGCGCCAGGGCGAGAACCTGTTCGTCGATGCCGACGGCCAGTGGACCGCGCCGCATTACGTTCCCGCCTATGT CCGCCGCTATCCCTTCATCCTTGCCGAGGACCCGACCACGGCGGGCCGGCTGACGCTGTGCGTCGACAGGACCAGTGAGC GGGTGATCGACCGGCTCATGGCGCCGTTTCGCGAAGACAAGATCGCCCCGTTCTTCAGCGGCAACGAGCCGACCGAAGCG ACGAAGCAGGCGCTCGCCTTCTGCAACCAGTTCCAGATCGACTTCAGGGCCACGCGCGAAATGATCGACAGGATCGACGC GCACGGCCTGTTCGCGCCGCGCCAGAGCAAGGTGACGCTGGAAGGCGGCGAAGTGCTCAACCTCACCGATTTCCAGGTGA TCGACGAGCCGGCCTTCAACAAGCTGAGCGACGAGGCCTTCCTCGACCTGAGAAAGTCAGGCGCCCTCGGCCTGCTCTAC TGCCACCTCGCCTCGACCAACAGCTGGACATCGCTGGTGCACCAGGCATCGCTGCGCAAGGCGGGGTAA
Upstream 100 bases:
>100_bases CTTGGCCCAACCAAGATCAGCGCAACAAGAGCAGATGCCAGTCTTGGGGTCTGATACGGAGAAGCCGGCCTGATCGGCCG GCGGGAGAAAGGGACCGACC
Downstream 100 bases:
>100_bases GCGCGACCGGCGGTCTCAAAACGAAAAGCCGCGGCGAACCTCGGCTTGCCGACAGGCCGGCACAGCGCCGCCTGAAAATC GGTTTTCGTGCTGCAGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: SapC-Related Protein; SapC Protein; SapC Superfamily; SapC-Like Protein; SapC Superfamily Protein; SAPC Family Protein; Sapc Family Protein
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MADIGAKTEAAPADAAMPLFYSRPEALNPVRHGSLGLTARGDFAFARTAHAIPVVASEMPAAMRSYPIVFIGPAKSPVII TGVRQGENLFVDADGQWTAPHYVPAYVRRYPFILAEDPTTAGRLTLCVDRTSERVIDRLMAPFREDKIAPFFSGNEPTEA TKQALAFCNQFQIDFRATREMIDRIDAHGLFAPRQSKVTLEGGEVLNLTDFQVIDEPAFNKLSDEAFLDLRKSGALGLLY CHLASTNSWTSLVHQASLRKAG
Sequences:
>Translated_262_residues MADIGAKTEAAPADAAMPLFYSRPEALNPVRHGSLGLTARGDFAFARTAHAIPVVASEMPAAMRSYPIVFIGPAKSPVII TGVRQGENLFVDADGQWTAPHYVPAYVRRYPFILAEDPTTAGRLTLCVDRTSERVIDRLMAPFREDKIAPFFSGNEPTEA TKQALAFCNQFQIDFRATREMIDRIDAHGLFAPRQSKVTLEGGEVLNLTDFQVIDEPAFNKLSDEAFLDLRKSGALGLLY CHLASTNSWTSLVHQASLRKAG >Mature_261_residues ADIGAKTEAAPADAAMPLFYSRPEALNPVRHGSLGLTARGDFAFARTAHAIPVVASEMPAAMRSYPIVFIGPAKSPVIIT GVRQGENLFVDADGQWTAPHYVPAYVRRYPFILAEDPTTAGRLTLCVDRTSERVIDRLMAPFREDKIAPFFSGNEPTEAT KQALAFCNQFQIDFRATREMIDRIDAHGLFAPRQSKVTLEGGEVLNLTDFQVIDEPAFNKLSDEAFLDLRKSGALGLLYC HLASTNSWTSLVHQASLRKAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28727; Mature: 28596
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIGAKTEAAPADAAMPLFYSRPEALNPVRHGSLGLTARGDFAFARTAHAIPVVASEMP CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCEEECCCCHHHHHCCCCCHHHHHCC AAMRSYPIVFIGPAKSPVIITGVRQGENLFVDADGQWTAPHYVPAYVRRYPFILAEDPTT HHHHHCCEEEECCCCCCEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHCCEEEECCCCC AGRLTLCVDRTSERVIDRLMAPFREDKIAPFFSGNEPTEATKQALAFCNQFQIDFRATRE CCEEEEEEECHHHHHHHHHHCCHHHCCCCCEECCCCCHHHHHHHHHHHHHCCCHHHHHHH MIDRIDAHGLFAPRQSKVTLEGGEVLNLTDFQVIDEPAFNKLSDEAFLDLRKSGALGLLY HHHHHHHCCCCCCCCCEEEECCCCEEEEECCEEECCCHHHHCCHHHHHHHHCCCCEEEEE CHLASTNSWTSLVHQASLRKAG EEECCCCHHHHHHHHHHHHCCC >Mature Secondary Structure ADIGAKTEAAPADAAMPLFYSRPEALNPVRHGSLGLTARGDFAFARTAHAIPVVASEMP CCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCEEECCCCHHHHHCCCCCHHHHHCC AAMRSYPIVFIGPAKSPVIITGVRQGENLFVDADGQWTAPHYVPAYVRRYPFILAEDPTT HHHHHCCEEEECCCCCCEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHCCEEEECCCCC AGRLTLCVDRTSERVIDRLMAPFREDKIAPFFSGNEPTEATKQALAFCNQFQIDFRATRE CCEEEEEEECHHHHHHHHHHCCHHHCCCCCEECCCCCHHHHHHHHHHHHHCCCHHHHHHH MIDRIDAHGLFAPRQSKVTLEGGEVLNLTDFQVIDEPAFNKLSDEAFLDLRKSGALGLLY HHHHHHHCCCCCCCCCEEEECCCCEEEEECCEEECCCHHHHCCHHHHHHHHCCCCEEEEE CHLASTNSWTSLVHQASLRKAG EEECCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA