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The map label for this gene is nahR [H]

Identifier: 13473737

GI number: 13473737

Start: 3515086

End: 3516000

Strand: Reverse

Name: nahR [H]

Synonym: mll4435

Alternate gene names: 13473737

Gene position: 3516000-3515086 (Counterclockwise)

Preceding gene: 13473739

Following gene: 13473736

Centisome position: 49.97

GC content: 61.2

Gene sequence:

>915_bases
ATGGATTTGAGCCGCGTCGATCTCAATCTGCTTGTCTCGCTCGACGTGCTGCTCGAAGAATGCAACGTGACTCGCGCGGC
GCAGCGGTTACATGTGAGCCAGCCTGCGTTGTCAGCGCAGCTTGGCCGGCTGCGTCATCTCTTCGACGATCCGCTGCTTG
TGCCCGCGATTGTGGGGCGCGGGATGACCCCAACTGCGCGCGCCCTGCCGCTTAGGGACTCGTTGAAAGCCGCGCTGAAG
GGCCTCGAAGTCGTTTTGGCTCGAGAGCATCCCTTCGATCCAGCACAAGACGCGCGCGATTTTCAGATCGCGACGACGGA
CAACGGCATCATCGTCGTTGGCTTGCCGTTGCTTTCAAGACTGCAATCGGAAGCCGGCGCCGGCGTTCGAGTGGCCTTTC
GACTGCTGGACACCACGCAACTGTCACAGCAGATTGAGCGCAGGGAAGTGGATCTTGTGATCGCACCGCCCAGCATGTTT
CCCCCGTTTCTCAAAGCGCGGCGCATCTACGATGAAGTCTATGCCATGGCGCAGAGGCGGGATCATCCGCGTGGTACCGA
ACCATTGAGTCTCGACGGCTATTGCGCGTTGGACCACGTCCTCGTGTCCCTTAAGGGCGGCCTCTACGAAGGCCGCGTCG
ATCAGGCCCTTGCCAAGCTCGGGCGCAACCGACGTGTGCGTCTGTCGCTGCCGAATTTTACGTCCGTGCCACAGGTGCTC
CAGGCTACCGACTACGTCTGCACGATGCCGGCGCGTTTCGCCAAAAGCCTGAAGGATGAATTGGACGTCTTCGAGTTGCC
GTTCGCCGTGCCCGGTTTCGCCATGCACATGGCGTGGCACCCGCGCGAGCAGTCCGATGCGGCACAATCTTGGCTGCGAA
CTCAAGTCCTGGAGGTCGTCAATAGCGGCCGGTGA

Upstream 100 bases:

>100_bases
AAGCTGCGTTCCATGACCGGGGCTTCCCGGGCCGTCTTGAGAATAGGTGTAGGGTCAGGTATCATTCAAATTGATAATAA
ATATAGGACGCATAACTTAG

Downstream 100 bases:

>100_bases
AGCGGCCGGCGTCCGAGAAGGCCACGAACCGGCCAGGCTGGTTCGTGCGAATCTGATCGTGCCGCGTGTTGACCAAGAGG
AAGACAGAAAGGGCCACCAT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MDLSRVDLNLLVSLDVLLEECNVTRAAQRLHVSQPALSAQLGRLRHLFDDPLLVPAIVGRGMTPTARALPLRDSLKAALK
GLEVVLAREHPFDPAQDARDFQIATTDNGIIVVGLPLLSRLQSEAGAGVRVAFRLLDTTQLSQQIERREVDLVIAPPSMF
PPFLKARRIYDEVYAMAQRRDHPRGTEPLSLDGYCALDHVLVSLKGGLYEGRVDQALAKLGRNRRVRLSLPNFTSVPQVL
QATDYVCTMPARFAKSLKDELDVFELPFAVPGFAMHMAWHPREQSDAAQSWLRTQVLEVVNSGR

Sequences:

>Translated_304_residues
MDLSRVDLNLLVSLDVLLEECNVTRAAQRLHVSQPALSAQLGRLRHLFDDPLLVPAIVGRGMTPTARALPLRDSLKAALK
GLEVVLAREHPFDPAQDARDFQIATTDNGIIVVGLPLLSRLQSEAGAGVRVAFRLLDTTQLSQQIERREVDLVIAPPSMF
PPFLKARRIYDEVYAMAQRRDHPRGTEPLSLDGYCALDHVLVSLKGGLYEGRVDQALAKLGRNRRVRLSLPNFTSVPQVL
QATDYVCTMPARFAKSLKDELDVFELPFAVPGFAMHMAWHPREQSDAAQSWLRTQVLEVVNSGR
>Mature_304_residues
MDLSRVDLNLLVSLDVLLEECNVTRAAQRLHVSQPALSAQLGRLRHLFDDPLLVPAIVGRGMTPTARALPLRDSLKAALK
GLEVVLAREHPFDPAQDARDFQIATTDNGIIVVGLPLLSRLQSEAGAGVRVAFRLLDTTQLSQQIERREVDLVIAPPSMF
PPFLKARRIYDEVYAMAQRRDHPRGTEPLSLDGYCALDHVLVSLKGGLYEGRVDQALAKLGRNRRVRLSLPNFTSVPQVL
QATDYVCTMPARFAKSLKDELDVFELPFAVPGFAMHMAWHPREQSDAAQSWLRTQVLEVVNSGR

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=304, Percent_Identity=26.3157894736842, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1786820, Length=290, Percent_Identity=21.3793103448276, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790147, Length=315, Percent_Identity=23.4920634920635, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33812; Mature: 33812

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSRVDLNLLVSLDVLLEECNVTRAAQRLHVSQPALSAQLGRLRHLFDDPLLVPAIVGR
CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHCC
GMTPTARALPLRDSLKAALKGLEVVLAREHPFDPAQDARDFQIATTDNGIIVVGLPLLSR
CCCCCHHCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEECCCCEEEECHHHHHH
LQSEAGAGVRVAFRLLDTTQLSQQIERREVDLVIAPPSMFPPFLKARRIYDEVYAMAQRR
HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHC
DHPRGTEPLSLDGYCALDHVLVSLKGGLYEGRVDQALAKLGRNRRVRLSLPNFTSVPQVL
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHH
QATDYVCTMPARFAKSLKDELDVFELPFAVPGFAMHMAWHPREQSDAAQSWLRTQVLEVV
HHCCHHEECHHHHHHHHHHHCCHHHCCCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHH
NSGR
HCCC
>Mature Secondary Structure
MDLSRVDLNLLVSLDVLLEECNVTRAAQRLHVSQPALSAQLGRLRHLFDDPLLVPAIVGR
CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHCC
GMTPTARALPLRDSLKAALKGLEVVLAREHPFDPAQDARDFQIATTDNGIIVVGLPLLSR
CCCCCHHCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEECCCCEEEECHHHHHH
LQSEAGAGVRVAFRLLDTTQLSQQIERREVDLVIAPPSMFPPFLKARRIYDEVYAMAQRR
HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHC
DHPRGTEPLSLDGYCALDHVLVSLKGGLYEGRVDQALAKLGRNRRVRLSLPNFTSVPQVL
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHH
QATDYVCTMPARFAKSLKDELDVFELPFAVPGFAMHMAWHPREQSDAAQSWLRTQVLEVV
HHCCHHEECHHHHHHHHHHHCCHHHCCCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHH
NSGR
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]