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The map label for this gene is ycaR [C]

Identifier: 13473733

GI number: 13473733

Start: 3512020

End: 3512265

Strand: Reverse

Name: ycaR [C]

Synonym: msl4429

Alternate gene names: 13473733

Gene position: 3512265-3512020 (Counterclockwise)

Preceding gene: 13473734

Following gene: 13473729

Centisome position: 49.92

GC content: 68.7

Gene sequence:

>246_bases
ATGGCGGCGGATGGGCGTGACGGAAAGAAGATCGATGTCGATCCCAAGCTGCTGGAGCTTTTGGCCTGCCCGCTGACCAA
GGGGCCGCTGGCCTGGGATCCAGAGCGCGGCGAACTGATCTCGCGGGTCGCCAAGCTCGCCTATCCTGTGCGCGACGGCA
TCCCGATCATGCTGCCCTCCGAGGCGCGGACGCTGTCGGCGGAAGATGTGCTGGCGCCGCCGCCGAGGCTGAGCGGGCCG
GCCTGA

Upstream 100 bases:

>100_bases
CGACCTGAAGACGCGGGCCGAGACGCTGATCGCCATCACCGAAATGGCGCTGGCACGGGAGAATGAGGATTTTGGCTCGA
GCCTACAGTAAGAGGAACCG

Downstream 100 bases:

>100_bases
ACTGCATAGCCGTCCATCGTTTGTTCTCCCAAGGAGAGCAGCCGCGAAGCAGCTGGGCGTAGAAGTTTGAGAGGCCGGCG
GGACAGCGCCCCCCTCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MAADGRDGKKIDVDPKLLELLACPLTKGPLAWDPERGELISRVAKLAYPVRDGIPIMLPSEARTLSAEDVLAPPPRLSGP
A

Sequences:

>Translated_81_residues
MAADGRDGKKIDVDPKLLELLACPLTKGPLAWDPERGELISRVAKLAYPVRDGIPIMLPSEARTLSAEDVLAPPPRLSGP
A
>Mature_80_residues
AADGRDGKKIDVDPKLLELLACPLTKGPLAWDPERGELISRVAKLAYPVRDGIPIMLPSEARTLSAEDVLAPPPRLSGPA

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family

Homologues:

Organism=Escherichia coli, GI1787146, Length=57, Percent_Identity=47.3684210526316, Blast_Score=67, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4429_RHILO (Q98E33)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_105301.1
- ProteinModelPortal:   Q98E33
- SMR:   Q98E33
- GeneID:   1227962
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:msl4429
- NMPDR:   fig|266835.1.peg.3405
- HOGENOM:   HBG713593
- OMA:   NELVSEK
- HAMAP:   MF_01187
- InterPro:   IPR005651

Pfam domain/function: PF03966 Trm112p

EC number: NA

Molecular weight: Translated: 8641; Mature: 8510

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAADGRDGKKIDVDPKLLELLACPLTKGPLAWDPERGELISRVAKLAYPVRDGIPIMLPS
CCCCCCCCCEECCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECC
EARTLSAEDVLAPPPRLSGPA
CCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AADGRDGKKIDVDPKLLELLACPLTKGPLAWDPERGELISRVAKLAYPVRDGIPIMLPS
CCCCCCCCEECCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECC
EARTLSAEDVLAPPPRLSGPA
CCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968