Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13473729

Identifier: 13473729

GI number: 13473729

Start: 3505325

End: 3505930

Strand: Reverse

Name: 13473729

Synonym: mll4425

Alternate gene names: NA

Gene position: 3505930-3505325 (Counterclockwise)

Preceding gene: 13473733

Following gene: 13473725

Centisome position: 49.83

GC content: 58.91

Gene sequence:

>606_bases
ATGACGGTCAGTGTCCACTCAGAGTTGTTCCTGTTATGTTCCTATAGATTCCAGAGGCGGTCCGAAGAGTCAAGCAGAGT
CATAAGGAATTTATTCCTGCGAACCCTGCGTGGCATGGACGTATGGGCCGCATCGTTTGCCTCGACCGGTGCGAAAGCCT
ATATGCCGGTCAAAGGACAAAGCATGGCCCGCATCTACAAGACCCGCACCTGGCATGGCGAACTCGCGCCCTCGATGGAG
GAGATGGAGTTCCTGGCGCTGGAGGCCTACGCCCATCTGCCGGAGGATTTTCGCAAGCTGACCGGCGAAATCGTCATCCA
GATCGCCGAGTTTCCGACCGACGAGATCATGGACGATCTGTCGCTGGAGACGCCGTTCGACCTGCTCGGCCTGTTCGAGG
GCCGCGGCATCGCCGAGCGCTGGAACCCGCAGACCGGCGAAGGCCCTAACCGCATCACGCTCTACCGCCGCGCCATGCTC
GACTACTGGGCCGAAAACGAGGAGACGCTGGGCGACATCGTCACCCATGTGCTGATCCACGAGATCGGCCATCATTTCGG
CCTGTCGGATGATGATATGGAGAAGATCGAAGAGGCAGCTGAATAG

Upstream 100 bases:

>100_bases
GCCAGCCGGCGCCTGCAGGCGCTCGGGCAGCGTTCCCTCGATCTTCGCGATCTGGCGGCGCAGGGCAAAAACAGTCTCCC
GCGCCACGGCTGATATCGCC

Downstream 100 bases:

>100_bases
AGCCCACACTTCGTCATCCTAGGGCGAAGCAAGGAGCGAAGCGACGCGGCGCAGACCCTAGGATCCATGCCGTGACTGTG
GTGCGTTGCGACGGTGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MTVSVHSELFLLCSYRFQRRSEESSRVIRNLFLRTLRGMDVWAASFASTGAKAYMPVKGQSMARIYKTRTWHGELAPSME
EMEFLALEAYAHLPEDFRKLTGEIVIQIAEFPTDEIMDDLSLETPFDLLGLFEGRGIAERWNPQTGEGPNRITLYRRAML
DYWAENEETLGDIVTHVLIHEIGHHFGLSDDDMEKIEEAAE

Sequences:

>Translated_201_residues
MTVSVHSELFLLCSYRFQRRSEESSRVIRNLFLRTLRGMDVWAASFASTGAKAYMPVKGQSMARIYKTRTWHGELAPSME
EMEFLALEAYAHLPEDFRKLTGEIVIQIAEFPTDEIMDDLSLETPFDLLGLFEGRGIAERWNPQTGEGPNRITLYRRAML
DYWAENEETLGDIVTHVLIHEIGHHFGLSDDDMEKIEEAAE
>Mature_200_residues
TVSVHSELFLLCSYRFQRRSEESSRVIRNLFLRTLRGMDVWAASFASTGAKAYMPVKGQSMARIYKTRTWHGELAPSMEE
MEFLALEAYAHLPEDFRKLTGEIVIQIAEFPTDEIMDDLSLETPFDLLGLFEGRGIAERWNPQTGEGPNRITLYRRAMLD
YWAENEETLGDIVTHVLIHEIGHHFGLSDDDMEKIEEAAE

Specific function: Unknown

COG id: COG3824

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23119; Mature: 22988

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSVHSELFLLCSYRFQRRSEESSRVIRNLFLRTLRGMDVWAASFASTGAKAYMPVKGQ
CEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCH
SMARIYKTRTWHGELAPSMEEMEFLALEAYAHLPEDFRKLTGEIVIQIAEFPTDEIMDDL
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHC
SLETPFDLLGLFEGRGIAERWNPQTGEGPNRITLYRRAMLDYWAENEETLGDIVTHVLIH
CCCCCHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EIGHHFGLSDDDMEKIEEAAE
HHHHHCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TVSVHSELFLLCSYRFQRRSEESSRVIRNLFLRTLRGMDVWAASFASTGAKAYMPVKGQ
EEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCH
SMARIYKTRTWHGELAPSMEEMEFLALEAYAHLPEDFRKLTGEIVIQIAEFPTDEIMDDL
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHC
SLETPFDLLGLFEGRGIAERWNPQTGEGPNRITLYRRAMLDYWAENEETLGDIVTHVLIH
CCCCCHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EIGHHFGLSDDDMEKIEEAAE
HHHHHCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA