| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473729
Identifier: 13473729
GI number: 13473729
Start: 3505325
End: 3505930
Strand: Reverse
Name: 13473729
Synonym: mll4425
Alternate gene names: NA
Gene position: 3505930-3505325 (Counterclockwise)
Preceding gene: 13473733
Following gene: 13473725
Centisome position: 49.83
GC content: 58.91
Gene sequence:
>606_bases ATGACGGTCAGTGTCCACTCAGAGTTGTTCCTGTTATGTTCCTATAGATTCCAGAGGCGGTCCGAAGAGTCAAGCAGAGT CATAAGGAATTTATTCCTGCGAACCCTGCGTGGCATGGACGTATGGGCCGCATCGTTTGCCTCGACCGGTGCGAAAGCCT ATATGCCGGTCAAAGGACAAAGCATGGCCCGCATCTACAAGACCCGCACCTGGCATGGCGAACTCGCGCCCTCGATGGAG GAGATGGAGTTCCTGGCGCTGGAGGCCTACGCCCATCTGCCGGAGGATTTTCGCAAGCTGACCGGCGAAATCGTCATCCA GATCGCCGAGTTTCCGACCGACGAGATCATGGACGATCTGTCGCTGGAGACGCCGTTCGACCTGCTCGGCCTGTTCGAGG GCCGCGGCATCGCCGAGCGCTGGAACCCGCAGACCGGCGAAGGCCCTAACCGCATCACGCTCTACCGCCGCGCCATGCTC GACTACTGGGCCGAAAACGAGGAGACGCTGGGCGACATCGTCACCCATGTGCTGATCCACGAGATCGGCCATCATTTCGG CCTGTCGGATGATGATATGGAGAAGATCGAAGAGGCAGCTGAATAG
Upstream 100 bases:
>100_bases GCCAGCCGGCGCCTGCAGGCGCTCGGGCAGCGTTCCCTCGATCTTCGCGATCTGGCGGCGCAGGGCAAAAACAGTCTCCC GCGCCACGGCTGATATCGCC
Downstream 100 bases:
>100_bases AGCCCACACTTCGTCATCCTAGGGCGAAGCAAGGAGCGAAGCGACGCGGCGCAGACCCTAGGATCCATGCCGTGACTGTG GTGCGTTGCGACGGTGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MTVSVHSELFLLCSYRFQRRSEESSRVIRNLFLRTLRGMDVWAASFASTGAKAYMPVKGQSMARIYKTRTWHGELAPSME EMEFLALEAYAHLPEDFRKLTGEIVIQIAEFPTDEIMDDLSLETPFDLLGLFEGRGIAERWNPQTGEGPNRITLYRRAML DYWAENEETLGDIVTHVLIHEIGHHFGLSDDDMEKIEEAAE
Sequences:
>Translated_201_residues MTVSVHSELFLLCSYRFQRRSEESSRVIRNLFLRTLRGMDVWAASFASTGAKAYMPVKGQSMARIYKTRTWHGELAPSME EMEFLALEAYAHLPEDFRKLTGEIVIQIAEFPTDEIMDDLSLETPFDLLGLFEGRGIAERWNPQTGEGPNRITLYRRAML DYWAENEETLGDIVTHVLIHEIGHHFGLSDDDMEKIEEAAE >Mature_200_residues TVSVHSELFLLCSYRFQRRSEESSRVIRNLFLRTLRGMDVWAASFASTGAKAYMPVKGQSMARIYKTRTWHGELAPSMEE MEFLALEAYAHLPEDFRKLTGEIVIQIAEFPTDEIMDDLSLETPFDLLGLFEGRGIAERWNPQTGEGPNRITLYRRAMLD YWAENEETLGDIVTHVLIHEIGHHFGLSDDDMEKIEEAAE
Specific function: Unknown
COG id: COG3824
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23119; Mature: 22988
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSVHSELFLLCSYRFQRRSEESSRVIRNLFLRTLRGMDVWAASFASTGAKAYMPVKGQ CEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCH SMARIYKTRTWHGELAPSMEEMEFLALEAYAHLPEDFRKLTGEIVIQIAEFPTDEIMDDL HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHC SLETPFDLLGLFEGRGIAERWNPQTGEGPNRITLYRRAMLDYWAENEETLGDIVTHVLIH CCCCCHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH EIGHHFGLSDDDMEKIEEAAE HHHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure TVSVHSELFLLCSYRFQRRSEESSRVIRNLFLRTLRGMDVWAASFASTGAKAYMPVKGQ EEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCH SMARIYKTRTWHGELAPSMEEMEFLALEAYAHLPEDFRKLTGEIVIQIAEFPTDEIMDDL HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHC SLETPFDLLGLFEGRGIAERWNPQTGEGPNRITLYRRAMLDYWAENEETLGDIVTHVLIH CCCCCHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH EIGHHFGLSDDDMEKIEEAAE HHHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA