| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13473688
Identifier: 13473688
GI number: 13473688
Start: 3471665
End: 3472207
Strand: Direct
Name: 13473688
Synonym: mlr4370
Alternate gene names: NA
Gene position: 3471665-3472207 (Clockwise)
Preceding gene: 13473687
Following gene: 13473690
Centisome position: 49.34
GC content: 64.64
Gene sequence:
>543_bases GTGCCCAGGCGCTCGGCCATTCCTGGAATCGGTTTCCTGCCCGCCTTGGCTGTCCTGGCAAGCTTGGCTGTTGCCAAAGC CGACGATTATGACCCCGCCTCGCTCGACCTCGCCGCGCTGATCGAATGCAGGGCCGACGTGTCCGCTTATACTGGCTATG CCCTTTGGCTGGCCGGTGATCCCGGCGCGGCCAGCACGCTCGGCTGGAAAGAGGTGCCGTCAGGCAATGCCTTCCTGCGG CAATATCAACTGCCCGCCCCGGCCCATGTCTTCGGTCATGAGACGGGGACAATCGTCTTTACCGCGTCGGGGCCGATGGC AGTGCTTGACGGCATTGCCGCTCCCGACCTCGCCCGGCAGCTCGACGTCCCGGCAATGGTCTCGTCGCCGGACAAATTCC TGGGCGAGAAGGTCGTGGCCGAGAGCACTGACGACACCGGCGGCGTCAGCCTTTCCACGCGCATCACGCTCAACGTCTCG ACCGTCGCTTCCCATCCCGGCAAGACGCTGGCCGGCTGCTCCTACGTGCTTGATGTGAAATAG
Upstream 100 bases:
>100_bases AACCCCAACTTCCGCAACTGCAGCGGTATTGACGGCCCCTTCCAGGTTCCCGCTTCCCAGAATTGCCCGTTGAGCGGTTA CGCGCATTATTGAGAGTGAT
Downstream 100 bases:
>100_bases AAAATCCGGCGTTGCACGGAGTTCGATTGAGCCAAGTGAAATACGCCCCCGGCTCAGGGATTTGACCGGCGCATCGGCGA CGACCCCGCATACCTTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MPRRSAIPGIGFLPALAVLASLAVAKADDYDPASLDLAALIECRADVSAYTGYALWLAGDPGAASTLGWKEVPSGNAFLR QYQLPAPAHVFGHETGTIVFTASGPMAVLDGIAAPDLARQLDVPAMVSSPDKFLGEKVVAESTDDTGGVSLSTRITLNVS TVASHPGKTLAGCSYVLDVK
Sequences:
>Translated_180_residues MPRRSAIPGIGFLPALAVLASLAVAKADDYDPASLDLAALIECRADVSAYTGYALWLAGDPGAASTLGWKEVPSGNAFLR QYQLPAPAHVFGHETGTIVFTASGPMAVLDGIAAPDLARQLDVPAMVSSPDKFLGEKVVAESTDDTGGVSLSTRITLNVS TVASHPGKTLAGCSYVLDVK >Mature_179_residues PRRSAIPGIGFLPALAVLASLAVAKADDYDPASLDLAALIECRADVSAYTGYALWLAGDPGAASTLGWKEVPSGNAFLRQ YQLPAPAHVFGHETGTIVFTASGPMAVLDGIAAPDLARQLDVPAMVSSPDKFLGEKVVAESTDDTGGVSLSTRITLNVST VASHPGKTLAGCSYVLDVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18526; Mature: 18395
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRSAIPGIGFLPALAVLASLAVAKADDYDPASLDLAALIECRADVSAYTGYALWLAGD CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECC PGAASTLGWKEVPSGNAFLRQYQLPAPAHVFGHETGTIVFTASGPMAVLDGIAAPDLARQ CCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCEEEEECCCCHHHHHCCCCCHHHHH LDVPAMVSSPDKFLGEKVVAESTDDTGGVSLSTRITLNVSTVASHPGKTLAGCSYVLDVK CCCCHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCEEEEECC >Mature Secondary Structure PRRSAIPGIGFLPALAVLASLAVAKADDYDPASLDLAALIECRADVSAYTGYALWLAGD CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECC PGAASTLGWKEVPSGNAFLRQYQLPAPAHVFGHETGTIVFTASGPMAVLDGIAAPDLARQ CCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCEEEEECCCCHHHHHCCCCCHHHHH LDVPAMVSSPDKFLGEKVVAESTDDTGGVSLSTRITLNVSTVASHPGKTLAGCSYVLDVK CCCCHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA