| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13473687
Identifier: 13473687
GI number: 13473687
Start: 3471172
End: 3471657
Strand: Direct
Name: 13473687
Synonym: mlr4369
Alternate gene names: NA
Gene position: 3471172-3471657 (Clockwise)
Preceding gene: 13473686
Following gene: 13473688
Centisome position: 49.33
GC content: 59.05
Gene sequence:
>486_bases GTGAGGGGAGCTTTTACAGTGAAAAATAGAATTTTTCTTCTGCTTGCGGTGGTCGCCGTCTTTGCCGGGCACCAATCAAC GCAGGCTCTGGCGGCGCAGACATCCAAGTTCCGTACCTGCAAAAGTTTTGATGGCCCGTTCCAGATTCCCGCTTCCCAGC AATGCCCGTTGAGCGGCTATGCGCAGGGTTCCGGAGTTCCGACGGTCATCGAGGGCAAGCGAAAGGCGGTTACCCCGGCG CGGCAGAACCCCAACTTCCGTACCTGCAAAAGTTTTGACGGCCCGTTCCAGATTCCCGTTTCCCAGCAATGCCCGCTGAG CGGTTACGCGCAGGGTTCCGGAGTTCCGACGGTCATCCAGGGCAAGCGAAAGGCGGTTACCCCGGCGCGGCAGAACCCCA ACTTCCGCAACTGCAGCGGTATTGACGGCCCCTTCCAGGTTCCCGCTTCCCAGAATTGCCCGTTGAGCGGTTACGCGCAT TATTGA
Upstream 100 bases:
>100_bases CGCCTTCCAGGTTCCCGCTTCCCAAAGATGCCCGGCGAGCGGCTACGCGCATTATTGAGAACGATGTGCGCAGGCGCTCG GATTTTTAGTTTTCTTAAGG
Downstream 100 bases:
>100_bases GAGTGATGTGCCCAGGCGCTCGGCCATTCCTGGAATCGGTTTCCTGCCCGCCTTGGCTGTCCTGGCAAGCTTGGCTGTTG CCAAAGCCGACGATTATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MRGAFTVKNRIFLLLAVVAVFAGHQSTQALAAQTSKFRTCKSFDGPFQIPASQQCPLSGYAQGSGVPTVIEGKRKAVTPA RQNPNFRTCKSFDGPFQIPVSQQCPLSGYAQGSGVPTVIQGKRKAVTPARQNPNFRNCSGIDGPFQVPASQNCPLSGYAH Y
Sequences:
>Translated_161_residues MRGAFTVKNRIFLLLAVVAVFAGHQSTQALAAQTSKFRTCKSFDGPFQIPASQQCPLSGYAQGSGVPTVIEGKRKAVTPA RQNPNFRTCKSFDGPFQIPVSQQCPLSGYAQGSGVPTVIQGKRKAVTPARQNPNFRNCSGIDGPFQVPASQNCPLSGYAH Y >Mature_161_residues MRGAFTVKNRIFLLLAVVAVFAGHQSTQALAAQTSKFRTCKSFDGPFQIPASQQCPLSGYAQGSGVPTVIEGKRKAVTPA RQNPNFRTCKSFDGPFQIPVSQQCPLSGYAQGSGVPTVIQGKRKAVTPARQNPNFRNCSGIDGPFQVPASQNCPLSGYAH Y
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17221; Mature: 17221
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGAFTVKNRIFLLLAVVAVFAGHQSTQALAAQTSKFRTCKSFDGPFQIPASQQCPLSGY CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCC AQGSGVPTVIEGKRKAVTPARQNPNFRTCKSFDGPFQIPVSQQCPLSGYAQGSGVPTVIQ CCCCCCCEEECCCCCCCCCCCCCCCCCEECCCCCCEECCCCCCCCCCCCCCCCCCCCEEC GKRKAVTPARQNPNFRNCSGIDGPFQVPASQNCPLSGYAHY CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC >Mature Secondary Structure MRGAFTVKNRIFLLLAVVAVFAGHQSTQALAAQTSKFRTCKSFDGPFQIPASQQCPLSGY CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCC AQGSGVPTVIEGKRKAVTPARQNPNFRTCKSFDGPFQIPVSQQCPLSGYAQGSGVPTVIQ CCCCCCCEEECCCCCCCCCCCCCCCCCEECCCCCCEECCCCCCCCCCCCCCCCCCCCEEC GKRKAVTPARQNPNFRNCSGIDGPFQVPASQNCPLSGYAHY CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA