Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13473675
Identifier: 13473675
GI number: 13473675
Start: 3459980
End: 3460342
Strand: Direct
Name: 13473675
Synonym: mlr4351
Alternate gene names: NA
Gene position: 3459980-3460342 (Clockwise)
Preceding gene: 13473674
Following gene: 13473677
Centisome position: 49.17
GC content: 64.19
Gene sequence:
>363_bases ATGGCGCAACAACCCGGTTTTGATTTCTTCGGCTTCGGCGACAGGCTGGGCGGCGAGGGCGAAGTGCGCGAGAAATTCTG GCGCACGGCCAAGAAGGCCGCGCGGCAGATCCCGTTCATGGAAGAGGTCGTCGCCGCCTATTACTGCGCCATGGACAAGA ACACGCCGCTGCGCGCCAAGGGCATATTGGTGGCCGCGCTCGGTTATTTCGTCCTGCCGGTGGACCTCATCCCCGACTTT ATCTTCGGCCTCGGTTTCACCGACGACATCGCCGTGCTGACCGCCGCGATCACCGCCGTCAGCGCGCACATCACGCCGGC ACATCGCCAAGCCGCCAGGGACGCCATAGCCGACAAGGGCTGA
Upstream 100 bases:
>100_bases CAAATCGGCACCGGCATCTTGCAGCCGGGTCCGGCTTTCACCACATTTCGCCTCGCGAGGCATGCGCCAGGACGCGCGTG AGACCCGCAAGGAGTGATGG
Downstream 100 bases:
>100_bases GCCGGTACGGCGCAAGGAATGGCGCGAGGCTCAGGCGCTGCGGCCGATCAAATCCACCGTCGCACCCGCACCCTGTAGGC ACGATACGCATCGCCGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MAQQPGFDFFGFGDRLGGEGEVREKFWRTAKKAARQIPFMEEVVAAYYCAMDKNTPLRAKGILVAALGYFVLPVDLIPDF IFGLGFTDDIAVLTAAITAVSAHITPAHRQAARDAIADKG
Sequences:
>Translated_120_residues MAQQPGFDFFGFGDRLGGEGEVREKFWRTAKKAARQIPFMEEVVAAYYCAMDKNTPLRAKGILVAALGYFVLPVDLIPDF IFGLGFTDDIAVLTAAITAVSAHITPAHRQAARDAIADKG >Mature_119_residues AQQPGFDFFGFGDRLGGEGEVREKFWRTAKKAARQIPFMEEVVAAYYCAMDKNTPLRAKGILVAALGYFVLPVDLIPDFI FGLGFTDDIAVLTAAITAVSAHITPAHRQAARDAIADKG
Specific function: Unknown
COG id: COG3339
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13036; Mature: 12905
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQQPGFDFFGFGDRLGGEGEVREKFWRTAKKAARQIPFMEEVVAAYYCAMDKNTPLRAK CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHH GILVAALGYFVLPVDLIPDFIFGLGFTDDIAVLTAAITAVSAHITPAHRQAARDAIADKG HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC >Mature Secondary Structure AQQPGFDFFGFGDRLGGEGEVREKFWRTAKKAARQIPFMEEVVAAYYCAMDKNTPLRAK CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHH GILVAALGYFVLPVDLIPDFIFGLGFTDDIAVLTAAITAVSAHITPAHRQAARDAIADKG HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA