Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
---|---|
Accession | NC_002678 |
Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13473677
Identifier: 13473677
GI number: 13473677
Start: 3461323
End: 3461826
Strand: Direct
Name: 13473677
Synonym: mlr4354
Alternate gene names: NA
Gene position: 3461323-3461826 (Clockwise)
Preceding gene: 13473675
Following gene: 13473680
Centisome position: 49.19
GC content: 62.7
Gene sequence:
>504_bases ATGCGCGGATTGATAGCACTAGTTTCGAGTCTGGTCCTGGTGGCCTCGGCAGCGCCCGTTCTGGCGCAGCAGGCGACCAA GATCGGCCAGCACAATGCCTGGGGCACCTACAGCTACCAGGCATCGGGCGGCAAGGTCTGCTACGTGCTCACCGTGCCGA CCGACAAGCAGCCGCCGACGCTCGACCATGGCGACATGTTCTTCTTCGTCAGCCAGCGTCCCGGCCAGCAGGTGTCCTAC GAGCCGCAATTCATCGCCGGCTACAATTTCCAGGAAGGCTCCAAGGCCACTGTCACCATCGACAAGAAGTCCTTCTCGAT GTTCACGCGCGGCAAGTCGGCCTGGGTCGAGAACGCCGCCGAGGAGCCGGTGCTGATCGCCGCCATGAAGACCGGCACCG ACATGAAGGTGACGGCGAAGTCCGGCCGCGGCAACCCCACCTCCTATGTCTTCTCGCTGAAGGGCATTTCGGCGGCGTTG TCGTCGATCGCCAAGTGCAAATAG
Upstream 100 bases:
>100_bases AGGGAAATTCACCGTTTGGTAACCCAGATTAAATCAAAATGAAGCGACGGCAGGACGCCATGCGGCCCGCCCCCGCACCA TTTGGAATACGGGAAAGACG
Downstream 100 bases:
>100_bases GCAAAACATCGTTTTGAAGCGAAAGGGCCGGGCCGCAAAGCTCGGCCCTTTGCTTTTTCAGACCTGACCTGTCTCCGCCC GCCGCCGCCGGATCGCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MRGLIALVSSLVLVASAAPVLAQQATKIGQHNAWGTYSYQASGGKVCYVLTVPTDKQPPTLDHGDMFFFVSQRPGQQVSY EPQFIAGYNFQEGSKATVTIDKKSFSMFTRGKSAWVENAAEEPVLIAAMKTGTDMKVTAKSGRGNPTSYVFSLKGISAAL SSIAKCK
Sequences:
>Translated_167_residues MRGLIALVSSLVLVASAAPVLAQQATKIGQHNAWGTYSYQASGGKVCYVLTVPTDKQPPTLDHGDMFFFVSQRPGQQVSY EPQFIAGYNFQEGSKATVTIDKKSFSMFTRGKSAWVENAAEEPVLIAAMKTGTDMKVTAKSGRGNPTSYVFSLKGISAAL SSIAKCK >Mature_167_residues MRGLIALVSSLVLVASAAPVLAQQATKIGQHNAWGTYSYQASGGKVCYVLTVPTDKQPPTLDHGDMFFFVSQRPGQQVSY EPQFIAGYNFQEGSKATVTIDKKSFSMFTRGKSAWVENAAEEPVLIAAMKTGTDMKVTAKSGRGNPTSYVFSLKGISAAL SSIAKCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17865; Mature: 17865
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGLIALVSSLVLVASAAPVLAQQATKIGQHNAWGTYSYQASGGKVCYVLTVPTDKQPPT CCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCCCCC LDHGDMFFFVSQRPGQQVSYEPQFIAGYNFQEGSKATVTIDKKSFSMFTRGKSAWVENAA CCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCEEEHHCCCHHHHCCCC EEPVLIAAMKTGTDMKVTAKSGRGNPTSYVFSLKGISAALSSIAKCK CCCEEEEEEECCCCEEEEECCCCCCCCEEEEEECCHHHHHHHHHCCC >Mature Secondary Structure MRGLIALVSSLVLVASAAPVLAQQATKIGQHNAWGTYSYQASGGKVCYVLTVPTDKQPPT CCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCCCCC LDHGDMFFFVSQRPGQQVSYEPQFIAGYNFQEGSKATVTIDKKSFSMFTRGKSAWVENAA CCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCEEEHHCCCHHHHCCCC EEPVLIAAMKTGTDMKVTAKSGRGNPTSYVFSLKGISAALSSIAKCK CCCEEEEEEECCCCEEEEECCCCCCCCEEEEEECCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA