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The map label for this gene is yhcM [H]

Identifier: 13473644

GI number: 13473644

Start: 3432034

End: 3433251

Strand: Reverse

Name: yhcM [H]

Synonym: mll4310

Alternate gene names: 13473644

Gene position: 3433251-3432034 (Counterclockwise)

Preceding gene: 13473645

Following gene: 13473642

Centisome position: 48.8

GC content: 65.76

Gene sequence:

>1218_bases
ATGCATCTGCGTGACGGCCTCCAGACCCATGCGACCGTCAGGCAGCGCTACGACCACCTGGTGGAAACCGGCGCGATCGG
ACGCGATCCGGCGCAGGAGCGGATCGCCGCCGCGCTCGACCGGCTGACCGACGAGATCTCGGCCAAGCGGCTGGCGCACA
AGTCCAGCGCGCTGGGCTGGCTGTTTGCCCGCAAGCGCGAGACGCATGAGGCCGTCAAAGGCCTCTACATCCATGGCGGC
GTCGGTCGCGGCAAGACCATGCTGATGGACATGTTCTTCGAACTGCTGCCGGTCCGGCGCAAGCGCCGCGTCCATTTCAA
CGACTTCATGGCCGATGTGCAGGACCGCATCCAGAAGCACCGGCAGGCACGCAAGAACGGCGACGTCAAAGAAGACGATC
CGATCCCGCCGGTGGCCAAGGCGCTGGCCGAACAGGCCTGGGTGCTGTGCTTCGATGAGTTCTCGGTTACCGACATCGCC
GACGCGATGATCCTGTCCAGGCTGTTTTCGGCGCTGTTCGCCAATGGCGTCGTGCTGATCGCCACCTCGAACGCGGCGCC
GCAAAATCTCTACCGCGATGGGCTCAACCGCCAGCTGTTCCTGCCGTTCATTGGCATTCTGGAACGGCACGCACAGGTGC
TGTCGCTCGACAGCGACAAGGATTACCGGCTGGAAAAGCTTGCTCGCACGCCGGTCTATGTCACGCCGGCTGACGCGGCG
GCCGACAAAGCGCTCGACGAGGCCTGGCGAACGATGACGCGCGGCGCGCCGACAGCCGCGACCTCGCTGACGCTGAAGGG
CCGGCAGGTTCTGGTGCCGGCCGCCGCCGGTGATGCGGCGCGGTTTTCCTTTGCCGATCTGTGCGAAAAACCGCACGGCG
CGCGCGATTTCCTGGCGATCGCAGGGCGCTTCTCGACCGTCTTCATCGACCACGTGCCGGTGCTGGGCGAAGGCAAGCGC
AACGAGGCCAAGCGCTTCATCCTGTTGATCGACACGCTTTACGATCATCATGCGCGGCTGGTGGTGAGCGCCGAGGCGGC
GCCGCAAGAGCTTTATGTGGCCAAGCGCGGCGTCGAGGTGTTCGAGTTCGAGCGCACGGCCTCACGCCTGATCGAGATGC
AAAGCCGCGATTGGCTGGAGGACTGGGCGGAGCGGCGGAAAGAAAGGGCGGCGCCGGCTGAGGCGCCGCAGGCTCAGGCC
CTACCTTCGCCGTCCTAG

Upstream 100 bases:

>100_bases
CCGATTTCGCTTACAAGGTAGCCCGATCTCCCCGGTGCATGTCGCCCGAACTGGGGCTCCGGTTTTGGGGCAACGACGTG
CATGAAAAAAGACGTGACCG

Downstream 100 bases:

>100_bases
GCTGAGGGACCCAAGCAGAGCGAAGGCCCTGATCACTAAAGCCTGTACGCATACATGACGAAACTCTCGGCTTCCCCATG
CGGCTCCTTGCGCGATTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MHLRDGLQTHATVRQRYDHLVETGAIGRDPAQERIAAALDRLTDEISAKRLAHKSSALGWLFARKRETHEAVKGLYIHGG
VGRGKTMLMDMFFELLPVRRKRRVHFNDFMADVQDRIQKHRQARKNGDVKEDDPIPPVAKALAEQAWVLCFDEFSVTDIA
DAMILSRLFSALFANGVVLIATSNAAPQNLYRDGLNRQLFLPFIGILERHAQVLSLDSDKDYRLEKLARTPVYVTPADAA
ADKALDEAWRTMTRGAPTAATSLTLKGRQVLVPAAAGDAARFSFADLCEKPHGARDFLAIAGRFSTVFIDHVPVLGEGKR
NEAKRFILLIDTLYDHHARLVVSAEAAPQELYVAKRGVEVFEFERTASRLIEMQSRDWLEDWAERRKERAAPAEAPQAQA
LPSPS

Sequences:

>Translated_405_residues
MHLRDGLQTHATVRQRYDHLVETGAIGRDPAQERIAAALDRLTDEISAKRLAHKSSALGWLFARKRETHEAVKGLYIHGG
VGRGKTMLMDMFFELLPVRRKRRVHFNDFMADVQDRIQKHRQARKNGDVKEDDPIPPVAKALAEQAWVLCFDEFSVTDIA
DAMILSRLFSALFANGVVLIATSNAAPQNLYRDGLNRQLFLPFIGILERHAQVLSLDSDKDYRLEKLARTPVYVTPADAA
ADKALDEAWRTMTRGAPTAATSLTLKGRQVLVPAAAGDAARFSFADLCEKPHGARDFLAIAGRFSTVFIDHVPVLGEGKR
NEAKRFILLIDTLYDHHARLVVSAEAAPQELYVAKRGVEVFEFERTASRLIEMQSRDWLEDWAERRKERAAPAEAPQAQA
LPSPS
>Mature_405_residues
MHLRDGLQTHATVRQRYDHLVETGAIGRDPAQERIAAALDRLTDEISAKRLAHKSSALGWLFARKRETHEAVKGLYIHGG
VGRGKTMLMDMFFELLPVRRKRRVHFNDFMADVQDRIQKHRQARKNGDVKEDDPIPPVAKALAEQAWVLCFDEFSVTDIA
DAMILSRLFSALFANGVVLIATSNAAPQNLYRDGLNRQLFLPFIGILERHAQVLSLDSDKDYRLEKLARTPVYVTPADAA
ADKALDEAWRTMTRGAPTAATSLTLKGRQVLVPAAAGDAARFSFADLCEKPHGARDFLAIAGRFSTVFIDHVPVLGEGKR
NEAKRFILLIDTLYDHHARLVVSAEAAPQELYVAKRGVEVFEFERTASRLIEMQSRDWLEDWAERRKERAAPAEAPQAQA
LPSPS

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=405, Percent_Identity=35.8024691358025, Blast_Score=263, Evalue=3e-70,
Organism=Escherichia coli, GI1789627, Length=376, Percent_Identity=36.1702127659575, Blast_Score=234, Evalue=8e-63,
Organism=Caenorhabditis elegans, GI17505769, Length=414, Percent_Identity=35.7487922705314, Blast_Score=248, Evalue=6e-66,
Organism=Saccharomyces cerevisiae, GI6320783, Length=396, Percent_Identity=32.8282828282828, Blast_Score=192, Evalue=7e-50,
Organism=Drosophila melanogaster, GI20129913, Length=426, Percent_Identity=34.7417840375587, Blast_Score=238, Evalue=6e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 45364; Mature: 45364

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLRDGLQTHATVRQRYDHLVETGAIGRDPAQERIAAALDRLTDEISAKRLAHKSSALGW
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFARKRETHEAVKGLYIHGGVGRGKTMLMDMFFELLPVRRKRRVHFNDFMADVQDRIQKH
HHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RQARKNGDVKEDDPIPPVAKALAEQAWVLCFDEFSVTDIADAMILSRLFSALFANGVVLI
HHHHHCCCCCCCCCCCHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEE
ATSNAAPQNLYRDGLNRQLFLPFIGILERHAQVLSLDSDKDYRLEKLARTPVYVTPADAA
EECCCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEECCCHHH
ADKALDEAWRTMTRGAPTAATSLTLKGRQVLVPAAAGDAARFSFADLCEKPHGARDFLAI
HHHHHHHHHHHHHCCCCCHHHEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHH
AGRFSTVFIDHVPVLGEGKRNEAKRFILLIDTLYDHHARLVVSAEAAPQELYVAKRGVEV
HHHHHEEEEECCCCCCCCCCCCHHEEEEEHHHHHCCCEEEEEECCCCCHHHHHHHCCCHH
FEFERTASRLIEMQSRDWLEDWAERRKERAAPAEAPQAQALPSPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHLRDGLQTHATVRQRYDHLVETGAIGRDPAQERIAAALDRLTDEISAKRLAHKSSALGW
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFARKRETHEAVKGLYIHGGVGRGKTMLMDMFFELLPVRRKRRVHFNDFMADVQDRIQKH
HHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RQARKNGDVKEDDPIPPVAKALAEQAWVLCFDEFSVTDIADAMILSRLFSALFANGVVLI
HHHHHCCCCCCCCCCCHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEE
ATSNAAPQNLYRDGLNRQLFLPFIGILERHAQVLSLDSDKDYRLEKLARTPVYVTPADAA
EECCCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEECCCHHH
ADKALDEAWRTMTRGAPTAATSLTLKGRQVLVPAAAGDAARFSFADLCEKPHGARDFLAI
HHHHHHHHHHHHHCCCCCHHHEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHH
AGRFSTVFIDHVPVLGEGKRNEAKRFILLIDTLYDHHARLVVSAEAAPQELYVAKRGVEV
HHHHHEEEEECCCCCCCCCCCCHHEEEEEHHHHHCCCEEEEEECCCCCHHHHHHHCCCHH
FEFERTASRLIEMQSRDWLEDWAERRKERAAPAEAPQAQALPSPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]