Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
---|---|
Accession | NC_002678 |
Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13473634
Identifier: 13473634
GI number: 13473634
Start: 3421611
End: 3422192
Strand: Reverse
Name: 13473634
Synonym: mll4299
Alternate gene names: NA
Gene position: 3422192-3421611 (Counterclockwise)
Preceding gene: 13473635
Following gene: 13473633
Centisome position: 48.64
GC content: 53.61
Gene sequence:
>582_bases ATGGCCGAGTCTGTCGAGCCAATCGACCTGTTCGAGCTTGTCGCGACAGGCCGCGCGGGTCCGATCGAACTCGGCAAGAG CAACCGTGAAACGGTTCGCAGCCTTATAGATACGGAGGATTTGCGAGCCGACAATCATTATCGCCACGGAGATCCCGAGT CGGCCTGGTGTATCTATGGCACCAATTGCGAGTTCTTCTTCAGCCCCGATTTTCGCTTGCGGTCGATTAGCATCGAACCT GTCTTCGGAAGATTGCAACCGGGTGGAATGATGTCGACTTGGCACGGCCATCTGGATGTCGATGTGGGGCGGCACCCAGC AATTTTTGGAGGCCGAAAGCCAATAGACATACATACTTTGCCGAAGGCCCTGCAGTTCCTGAACGAGAGCGAATTCAGGT GGACAATCGGCGGTGGCCGGGAGCGCGACATCTATATCGAGTTGGCGGATGGTTCTCGTATCTTGACCCTCAAATACGAG GTGAACACCATTCCGGTCGACAAGGATAATAACGTTGCGTTCGAGATAGACTATTTTCTCTCGACGATCCTCATTCTCGA TCAAGCTGTTCAAGGCGGATAA
Upstream 100 bases:
>100_bases CGCATCGTCGACGGCAAGGAAGCCGTGACCTTCCTGGTGCGCGTCAAGGAAAGCCTGGAGGATCCGGAACGGCTGGTGCT CGATCTCTAGGCCTGCTGCG
Downstream 100 bases:
>100_bases GCGTGACGATCCGTTCGTTCTTGTCGGAAAGCCTGTCGACTGCATCGATAGCGGTCGGTGCGGCGATGATCCCGGCGAAC GCGTTCGCCGCCTGCCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MAESVEPIDLFELVATGRAGPIELGKSNRETVRSLIDTEDLRADNHYRHGDPESAWCIYGTNCEFFFSPDFRLRSISIEP VFGRLQPGGMMSTWHGHLDVDVGRHPAIFGGRKPIDIHTLPKALQFLNESEFRWTIGGGRERDIYIELADGSRILTLKYE VNTIPVDKDNNVAFEIDYFLSTILILDQAVQGG
Sequences:
>Translated_193_residues MAESVEPIDLFELVATGRAGPIELGKSNRETVRSLIDTEDLRADNHYRHGDPESAWCIYGTNCEFFFSPDFRLRSISIEP VFGRLQPGGMMSTWHGHLDVDVGRHPAIFGGRKPIDIHTLPKALQFLNESEFRWTIGGGRERDIYIELADGSRILTLKYE VNTIPVDKDNNVAFEIDYFLSTILILDQAVQGG >Mature_192_residues AESVEPIDLFELVATGRAGPIELGKSNRETVRSLIDTEDLRADNHYRHGDPESAWCIYGTNCEFFFSPDFRLRSISIEPV FGRLQPGGMMSTWHGHLDVDVGRHPAIFGGRKPIDIHTLPKALQFLNESEFRWTIGGGRERDIYIELADGSRILTLKYEV NTIPVDKDNNVAFEIDYFLSTILILDQAVQGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21753; Mature: 21622
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESVEPIDLFELVATGRAGPIELGKSNRETVRSLIDTEDLRADNHYRHGDPESAWCIYG CCCCCCCHHHHHHHHCCCCCCEECCCCCHHHHHHHHCHHHCCCCCCCCCCCCCCEEEEEE TNCEFFFSPDFRLRSISIEPVFGRLQPGGMMSTWHGHLDVDVGRHPAIFGGRKPIDIHTL CCEEEEECCCCEEEEEEECCEEECCCCCCCEEEECCEEEEECCCCCCEECCCCCEEHHHH PKALQFLNESEFRWTIGGGRERDIYIELADGSRILTLKYEVNTIPVDKDNNVAFEIDYFL HHHHHHCCCCCEEEEECCCCCEEEEEEECCCCEEEEEEEEEEEEECCCCCCEEEEHHHHH STILILDQAVQGG HHHHHHHHHHCCC >Mature Secondary Structure AESVEPIDLFELVATGRAGPIELGKSNRETVRSLIDTEDLRADNHYRHGDPESAWCIYG CCCCCCHHHHHHHHCCCCCCEECCCCCHHHHHHHHCHHHCCCCCCCCCCCCCCEEEEEE TNCEFFFSPDFRLRSISIEPVFGRLQPGGMMSTWHGHLDVDVGRHPAIFGGRKPIDIHTL CCEEEEECCCCEEEEEEECCEEECCCCCCCEEEECCEEEEECCCCCCEECCCCCEEHHHH PKALQFLNESEFRWTIGGGRERDIYIELADGSRILTLKYEVNTIPVDKDNNVAFEIDYFL HHHHHHCCCCCEEEEECCCCCEEEEEEECCCCEEEEEEEEEEEEECCCCCCEEEEHHHHH STILILDQAVQGG HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA