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The map label for this gene is yedQ [H]

Identifier: 13473612

GI number: 13473612

Start: 3403409

End: 3404620

Strand: Reverse

Name: yedQ [H]

Synonym: mll4270

Alternate gene names: 13473612

Gene position: 3404620-3403409 (Counterclockwise)

Preceding gene: 13473613

Following gene: 13473610

Centisome position: 48.39

GC content: 65.1

Gene sequence:

>1212_bases
ATGAGCGGCGCGAACTTCATCCTGTTGATCAACCTGTCGGTTGCCGGCCTGCTGGCGGCATCCTTCATGGCGGTCGCGTT
TCATGATGTCGGCCGCGCCCCGGCGCGCTGGTTTGCTTCCGGCTATGTCCTGGGCATGGTCTATTCGGCGATCGAATTCA
GCATTCCCGCCTTCAGCGATGCCCTGCTGCCGGTGGTTACCGCCTTCGCGGTCTTCCTTGGCGCAACAATAGCCTTCAAC
GTCGGACTGGCCCGCAAATACGGCGTGGCGCCGCCATGGTCGTCGATGCTGTTGTTCCTGGTCGCCGCCACCATCGTCGT
CTATTTCGTCCAGGACCTGCCGCGCCAGTCGCTGGCCCGCATGATGGCCTACCAGCTCCCCTATGCCGTCATGCAACTGG
TCGGATTGGCCATCGTCTGGTCGTCCAGGCAAAGGCGTGGCCGGCTCGATCGCATCCTGATGGCGGTGCTCGCCGCCAGC
GCTGTGCAGTTCGCTTCAAAGCCGTTCATCGCGCATGCGCTCGGCGGCTGGGGCGCCAATCCGCAGGCCTATCTGCAAAG
CAGCTACGCGCTGGTGTCGCAATCGCTCGGCACCGTCTTTGCCCTGGCCATGGCGCTGCTGACGCTGGCCATCCTGGTCC
GCGATGTGTTGGCCGAAGTGACGTCGAGATCGGAGACCGATACGCTTTCCAGACTGCTCAATCGCGGCGCCTTCACGCGC
CAGGCCGAGCAGGCCGTGCTTGGCGCCATGCGGCAAGGCGTGCCGGTCGCGCTGGTCATCGCCGATCTCGATCATTTCAA
GAGCATCAACGACAATTTCGGCCATGCCTCCGGCGACCGGGTGATCGAGACCTTTGCCGGTTTCCTGCGCGAAGCCGCCG
CCGGGCACCATGTCGCGGGCCGCATCGGCGGCGAGGAATTCGCCATCATCCTGCCGGGAACCAATCTCGCCGCCGCCCGG
CTGTTCGCCGAAGGCACGCGCAGCGCGTTCGGCGCGCTGCCCATTGGCGGGCTGCCGGCGGACAATCGCTGCACGGCGAG
TTTCGGGGTTGCCGAACTTCATACCGGTGAAACCATCGCCGATCTCATGCGCCGCGCCGACGAGGCGCTCTATTTGGCAA
AGAATGCCGGGCGCGACTGCGTCCGTGTCTCGGCCGGGCCGGGAGGCGAGTGGTCGTCCAGCGCGATCGTCATCAATTCC
CGGTCAGGATGA

Upstream 100 bases:

>100_bases
TGCCGGAGCCGTCCAGGGCCGGCTGAAGCCGTGCGTCCCAGCCCACGTTAACGTCTTTTTCGCCCGTCGGTGTTTAGCTA
AGGCGCGGGGTGCGAAAGAG

Downstream 100 bases:

>100_bases
CGTCGGTCGAATCGTCATCCTGATGCCTCCTTCGCCGTTTCCGTGAAACGGTGAGCTGTCCTAGCGACAGGGGCTGAGTT
CGGGCATCTCGCCGTCGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MSGANFILLINLSVAGLLAASFMAVAFHDVGRAPARWFASGYVLGMVYSAIEFSIPAFSDALLPVVTAFAVFLGATIAFN
VGLARKYGVAPPWSSMLLFLVAATIVVYFVQDLPRQSLARMMAYQLPYAVMQLVGLAIVWSSRQRRGRLDRILMAVLAAS
AVQFASKPFIAHALGGWGANPQAYLQSSYALVSQSLGTVFALAMALLTLAILVRDVLAEVTSRSETDTLSRLLNRGAFTR
QAEQAVLGAMRQGVPVALVIADLDHFKSINDNFGHASGDRVIETFAGFLREAAAGHHVAGRIGGEEFAIILPGTNLAAAR
LFAEGTRSAFGALPIGGLPADNRCTASFGVAELHTGETIADLMRRADEALYLAKNAGRDCVRVSAGPGGEWSSSAIVINS
RSG

Sequences:

>Translated_403_residues
MSGANFILLINLSVAGLLAASFMAVAFHDVGRAPARWFASGYVLGMVYSAIEFSIPAFSDALLPVVTAFAVFLGATIAFN
VGLARKYGVAPPWSSMLLFLVAATIVVYFVQDLPRQSLARMMAYQLPYAVMQLVGLAIVWSSRQRRGRLDRILMAVLAAS
AVQFASKPFIAHALGGWGANPQAYLQSSYALVSQSLGTVFALAMALLTLAILVRDVLAEVTSRSETDTLSRLLNRGAFTR
QAEQAVLGAMRQGVPVALVIADLDHFKSINDNFGHASGDRVIETFAGFLREAAAGHHVAGRIGGEEFAIILPGTNLAAAR
LFAEGTRSAFGALPIGGLPADNRCTASFGVAELHTGETIADLMRRADEALYLAKNAGRDCVRVSAGPGGEWSSSAIVINS
RSG
>Mature_402_residues
SGANFILLINLSVAGLLAASFMAVAFHDVGRAPARWFASGYVLGMVYSAIEFSIPAFSDALLPVVTAFAVFLGATIAFNV
GLARKYGVAPPWSSMLLFLVAATIVVYFVQDLPRQSLARMMAYQLPYAVMQLVGLAIVWSSRQRRGRLDRILMAVLAASA
VQFASKPFIAHALGGWGANPQAYLQSSYALVSQSLGTVFALAMALLTLAILVRDVLAEVTSRSETDTLSRLLNRGAFTRQ
AEQAVLGAMRQGVPVALVIADLDHFKSINDNFGHASGDRVIETFAGFLREAAAGHHVAGRIGGEEFAIILPGTNLAAARL
FAEGTRSAFGALPIGGLPADNRCTASFGVAELHTGETIADLMRRADEALYLAKNAGRDCVRVSAGPGGEWSSSAIVINSR
SG

Specific function: Involves in the regulation of cellulose production [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87082007, Length=158, Percent_Identity=41.7721518987342, Blast_Score=108, Evalue=7e-25,
Organism=Escherichia coli, GI87081881, Length=155, Percent_Identity=39.3548387096774, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI1787802, Length=261, Percent_Identity=25.6704980842912, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1787262, Length=162, Percent_Identity=33.9506172839506, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1788381, Length=171, Percent_Identity=32.1637426900585, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI145693134, Length=204, Percent_Identity=29.4117647058824, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786584, Length=174, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI87081974, Length=172, Percent_Identity=26.1627906976744, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787541, Length=155, Percent_Identity=29.6774193548387, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 42640; Mature: 42509

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGANFILLINLSVAGLLAASFMAVAFHDVGRAPARWFASGYVLGMVYSAIEFSIPAFSD
CCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
ALLPVVTAFAVFLGATIAFNVGLARKYGVAPPWSSMLLFLVAATIVVYFVQDLPRQSLAR
HHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
MMAYQLPYAVMQLVGLAIVWSSRQRRGRLDRILMAVLAASAVQFASKPFIAHALGGWGAN
HHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC
PQAYLQSSYALVSQSLGTVFALAMALLTLAILVRDVLAEVTSRSETDTLSRLLNRGAFTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHH
QAEQAVLGAMRQGVPVALVIADLDHFKSINDNFGHASGDRVIETFAGFLREAAAGHHVAG
HHHHHHHHHHHCCCCEEEEEECHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHC
RIGGEEFAIILPGTNLAAARLFAEGTRSAFGALPIGGLPADNRCTASFGVAELHTGETIA
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCHHHH
DLMRRADEALYLAKNAGRDCVRVSAGPGGEWSSSAIVINSRSG
HHHHHHHHHEEHHHCCCCCEEEEECCCCCCCCCCEEEEECCCC
>Mature Secondary Structure 
SGANFILLINLSVAGLLAASFMAVAFHDVGRAPARWFASGYVLGMVYSAIEFSIPAFSD
CCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
ALLPVVTAFAVFLGATIAFNVGLARKYGVAPPWSSMLLFLVAATIVVYFVQDLPRQSLAR
HHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
MMAYQLPYAVMQLVGLAIVWSSRQRRGRLDRILMAVLAASAVQFASKPFIAHALGGWGAN
HHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC
PQAYLQSSYALVSQSLGTVFALAMALLTLAILVRDVLAEVTSRSETDTLSRLLNRGAFTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHH
QAEQAVLGAMRQGVPVALVIADLDHFKSINDNFGHASGDRVIETFAGFLREAAAGHHVAG
HHHHHHHHHHHCCCCEEEEEECHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHC
RIGGEEFAIILPGTNLAAARLFAEGTRSAFGALPIGGLPADNRCTASFGVAELHTGETIA
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCHHHH
DLMRRADEALYLAKNAGRDCVRVSAGPGGEWSSSAIVINSRSG
HHHHHHHHHEEHHHCCCCCEEEEECCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]