| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473575
Identifier: 13473575
GI number: 13473575
Start: 3371034
End: 3372488
Strand: Reverse
Name: 13473575
Synonym: mll4219
Alternate gene names: NA
Gene position: 3372488-3371034 (Counterclockwise)
Preceding gene: 13473576
Following gene: 13473574
Centisome position: 47.93
GC content: 67.84
Gene sequence:
>1455_bases ATGCGACACTCGAAAAGCCGCCGCGAGCCGGTGACCATCGATCTCGAGCCCGGTGCCGTTTCCCGCATCGTCGACGAGGA TGCCGCCAAGGCAGCGGCCCAGACCGACGAGGCGAAGGCTGAGGAAGCCGCTGATGCCTCGCAGCCGGAGGCTCCGGAAG AGCCGGTGCATGCCGACCAGACCGATCTCGAACCCTGGGAGCATGCCGATGGCGTGGGGCAGGCCGGGACCGAGCCGTCC GCTGAGGCCAAGGCCGTTGAGCCGGAGATGCCCTATCCCGGTTCCGATGCGCCAGCTGATCGCAGTGCCGCCTCCGACTA CAATTTCGAGGATGCGTCGGCCAAGCGCAGCGATGGCAGCAAGGCAAAAACCCAGACGCGGGACGAAAAGATGGCGCCGA CGCCTGCCGCAGCAAAGCGTGGCGGTCTCAACGGCATCGCCGCCGGCATTATCGGGGGCGTCATTGCGCTCGCCGGCGCC GGCGGCCTGCAATTTGCCGGCCTGCTCGGCGCGCCGGGTTCCGGCGCCGGCGTCTCGCTCGACGGCGTCAATGGCGAGAT CGCTTCGCTGAAGAGCGAAATCGCCGGCCTGAAGGAAACCGGCGGCAACAACGATGCAGCGGCCAAGGTGGTCGGGCTTT CCTCGGGGCTGGAGCAGGTAAAGGCCGATATCGCGGCGCTGAAATCGGCGGTCGAAAAGGGCGGCGCCGGCGACAATGCC GGGCTTGCGGCCCTCGGCGACAAGGTCAAGCAGATCGAAACCGCGGTCGCTGCCCTTGGCAAGGCCGGCAGCGCCGCACC GGTCGATCTTGGCCCGCTCAACGAAAAGCTGGCCGGTCTCGATGCGCTGGTGAAATCGACAGGCGAGGCGGCCAAGGCCC AGGACAGCCGGCTCGCCGCGCTGGAACAGTCGGTGTCGCAGCTTTCCGGCAAGGTCGAGGCGGCGGCAGGACAGCCGAAG ATCGCGCTCGCCATTGCCGCGTCGGCTTTGAAGTCGGCGCTCGAACGCGGTGCGCCGTTCTCGGCTGAACTCGATACGCT GGCCGCGATTTCGCCCAACGCGCCTGAGCTCGCGACCTTGCGGCCCTATGCCGAAAAGGGCGTGCCCACCCGCACCGAGA TCGCCTCGCAAATGGATGCCGCCGCCAATGCCATGGTCGCCGCCGCCACGCCGGCCGACCAGAATGCCGGCTTCCTGCAG AACCTGATGTCGAGCGCCCAATCGCTGGTCAAGGTCCGGCCGATCGGTGCCGTCGAGGGGCCTGGCGCGCCGGAAACCGT GGCGCGCATGGAAGTGGCGGTCCGCCAGGGCGACTATGCCAAGGCGCTCAGCGAATACAATTCGCTGCCCGAGGCCGTGA AGGCCGCCGGTGCCGACTTTGCCGGCAAACTGAAGGCGCGCATCGAGGTCGAAACCCAGGTCGACGCGCTGATCTCCGGC GCGATGAAGGCATGA
Upstream 100 bases:
>100_bases CGCTTGGTGATGTGCTAGACCCTTTCTGAACCATCACGCGCCGGCAGGCGTTGAGACGAAGCGAATTTTGCGGAGCCCAG GCATGGTCAAGACGCCGAAG
Downstream 100 bases:
>100_bases GGGCAACACGATGATCCGCCTGCTCGCCTTCCTCATCGTCGTCTTCGCGCTCGGGCTCGGCTTTGCCTGGCTGGCCGACC GGCCCGGCGACATGGTCGTC
Product: putative phage tail protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MRHSKSRREPVTIDLEPGAVSRIVDEDAAKAAAQTDEAKAEEAADASQPEAPEEPVHADQTDLEPWEHADGVGQAGTEPS AEAKAVEPEMPYPGSDAPADRSAASDYNFEDASAKRSDGSKAKTQTRDEKMAPTPAAAKRGGLNGIAAGIIGGVIALAGA GGLQFAGLLGAPGSGAGVSLDGVNGEIASLKSEIAGLKETGGNNDAAAKVVGLSSGLEQVKADIAALKSAVEKGGAGDNA GLAALGDKVKQIETAVAALGKAGSAAPVDLGPLNEKLAGLDALVKSTGEAAKAQDSRLAALEQSVSQLSGKVEAAAGQPK IALAIAASALKSALERGAPFSAELDTLAAISPNAPELATLRPYAEKGVPTRTEIASQMDAAANAMVAAATPADQNAGFLQ NLMSSAQSLVKVRPIGAVEGPGAPETVARMEVAVRQGDYAKALSEYNSLPEAVKAAGADFAGKLKARIEVETQVDALISG AMKA
Sequences:
>Translated_484_residues MRHSKSRREPVTIDLEPGAVSRIVDEDAAKAAAQTDEAKAEEAADASQPEAPEEPVHADQTDLEPWEHADGVGQAGTEPS AEAKAVEPEMPYPGSDAPADRSAASDYNFEDASAKRSDGSKAKTQTRDEKMAPTPAAAKRGGLNGIAAGIIGGVIALAGA GGLQFAGLLGAPGSGAGVSLDGVNGEIASLKSEIAGLKETGGNNDAAAKVVGLSSGLEQVKADIAALKSAVEKGGAGDNA GLAALGDKVKQIETAVAALGKAGSAAPVDLGPLNEKLAGLDALVKSTGEAAKAQDSRLAALEQSVSQLSGKVEAAAGQPK IALAIAASALKSALERGAPFSAELDTLAAISPNAPELATLRPYAEKGVPTRTEIASQMDAAANAMVAAATPADQNAGFLQ NLMSSAQSLVKVRPIGAVEGPGAPETVARMEVAVRQGDYAKALSEYNSLPEAVKAAGADFAGKLKARIEVETQVDALISG AMKA >Mature_484_residues MRHSKSRREPVTIDLEPGAVSRIVDEDAAKAAAQTDEAKAEEAADASQPEAPEEPVHADQTDLEPWEHADGVGQAGTEPS AEAKAVEPEMPYPGSDAPADRSAASDYNFEDASAKRSDGSKAKTQTRDEKMAPTPAAAKRGGLNGIAAGIIGGVIALAGA GGLQFAGLLGAPGSGAGVSLDGVNGEIASLKSEIAGLKETGGNNDAAAKVVGLSSGLEQVKADIAALKSAVEKGGAGDNA GLAALGDKVKQIETAVAALGKAGSAAPVDLGPLNEKLAGLDALVKSTGEAAKAQDSRLAALEQSVSQLSGKVEAAAGQPK IALAIAASALKSALERGAPFSAELDTLAAISPNAPELATLRPYAEKGVPTRTEIASQMDAAANAMVAAATPADQNAGFLQ NLMSSAQSLVKVRPIGAVEGPGAPETVARMEVAVRQGDYAKALSEYNSLPEAVKAAGADFAGKLKARIEVETQVDALISG AMKA
Specific function: Unknown
COG id: COG4223
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48468; Mature: 48468
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHSKSRREPVTIDLEPGAVSRIVDEDAAKAAAQTDEAKAEEAADASQPEAPEEPVHADQ CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC TDLEPWEHADGVGQAGTEPSAEAKAVEPEMPYPGSDAPADRSAASDYNFEDASAKRSDGS CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KAKTQTRDEKMAPTPAAAKRGGLNGIAAGIIGGVIALAGAGGLQFAGLLGAPGSGAGVSL HHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEE DGVNGEIASLKSEIAGLKETGGNNDAAAKVVGLSSGLEQVKADIAALKSAVEKGGAGDNA CCCCCHHHHHHHHHHHHHHCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GLAALGDKVKQIETAVAALGKAGSAAPVDLGPLNEKLAGLDALVKSTGEAAKAQDSRLAA CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH LEQSVSQLSGKVEAAAGQPKIALAIAASALKSALERGAPFSAELDTLAAISPNAPELATL HHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCEE RPYAEKGVPTRTEIASQMDAAANAMVAAATPADQNAGFLQNLMSSAQSLVKVRPIGAVEG CCHHHCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC PGAPETVARMEVAVRQGDYAKALSEYNSLPEAVKAAGADFAGKLKARIEVETQVDALISG CCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHH AMKA HCCC >Mature Secondary Structure MRHSKSRREPVTIDLEPGAVSRIVDEDAAKAAAQTDEAKAEEAADASQPEAPEEPVHADQ CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC TDLEPWEHADGVGQAGTEPSAEAKAVEPEMPYPGSDAPADRSAASDYNFEDASAKRSDGS CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KAKTQTRDEKMAPTPAAAKRGGLNGIAAGIIGGVIALAGAGGLQFAGLLGAPGSGAGVSL HHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEE DGVNGEIASLKSEIAGLKETGGNNDAAAKVVGLSSGLEQVKADIAALKSAVEKGGAGDNA CCCCCHHHHHHHHHHHHHHCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GLAALGDKVKQIETAVAALGKAGSAAPVDLGPLNEKLAGLDALVKSTGEAAKAQDSRLAA CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH LEQSVSQLSGKVEAAAGQPKIALAIAASALKSALERGAPFSAELDTLAAISPNAPELATL HHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCEE RPYAEKGVPTRTEIASQMDAAANAMVAAATPADQNAGFLQNLMSSAQSLVKVRPIGAVEG CCHHHCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC PGAPETVARMEVAVRQGDYAKALSEYNSLPEAVKAAGADFAGKLKARIEVETQVDALISG CCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHH AMKA HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA