| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473504
Identifier: 13473504
GI number: 13473504
Start: 3301183
End: 3301869
Strand: Reverse
Name: 13473504
Synonym: mll4125
Alternate gene names: NA
Gene position: 3301869-3301183 (Counterclockwise)
Preceding gene: 13473505
Following gene: 13473503
Centisome position: 46.93
GC content: 65.65
Gene sequence:
>687_bases GTGGCGGCTCGTCCGGTGGTGGCGGTTCTTCAGGAAGCTGGTGAGACAATGGCAACACGACCGATCAGCCCGCAGGATCA TGAGCGCATCGCCGATGCGATCCGTGCCGCCGAGACCAAAACCGACGGCGAAATCTACTGCGTCGTCGCCCATGCCAGTG ACGGCTATTTCGCTCCCGCCGCCTTGATGGCGACGCTGGGCATGCTGGTTGTCAGCCTCGCCGTCGCCTATGGGCTGGAG GCGTGGTGGCTCACCATCCGCCTGCCGCATTTCGTCATAGCCCAATTGCTGGCGCTGGCCTGCGTGCTGGCCCTGTTGTG GGCGGTTCCCGGGCTGCGCATCCATATGGTGCCACGGCGGCTGCGCTATCAGGCCGCGCACGCCAATGCGATCAAGCAGT TCCTCGCCCGCAACGTCCACCGCACCACGGCGCGCACCGGCGTGCTGATCTTCGTCTCGATCGCCGAGCGCTATGCCGAG GTAGTCGCCGATTCGGGCATCGACGCCAAGGTCGGCCAGCATGTCTGGGATGGCGTGGTGCGGGACCTGACGGCGCACGC CGGCGACGACCGACTTGCCGACGGCTTCGTCAAGGCGATCGAGCAGGTGGGGTCGGTGCTGGCCGAGCATTTCCCGGTCA CCTCAGGCGATACCAACGAGCTGGACGACCATCTGGTCGAAATCTGA
Upstream 100 bases:
>100_bases GGCTGGACGACGGGTTCGTCGGGCGGCGGCTGGTCGTCGGGAAGCTCCAGCAGTGGCTGGTCGTCCGGGTCGAGCAGCAG CGGCGGCGGGTTTTCGGGCG
Downstream 100 bases:
>100_bases AAAGCCTGTCTGCAAACGCTACTCAGCCGAGACGTCTGACGCGGCTTTCTGCGCTTCCCCGTTCTACTGCGTCGCAGTAG AACTGAGTTCACGGACCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MAARPVVAVLQEAGETMATRPISPQDHERIADAIRAAETKTDGEIYCVVAHASDGYFAPAALMATLGMLVVSLAVAYGLE AWWLTIRLPHFVIAQLLALACVLALLWAVPGLRIHMVPRRLRYQAAHANAIKQFLARNVHRTTARTGVLIFVSIAERYAE VVADSGIDAKVGQHVWDGVVRDLTAHAGDDRLADGFVKAIEQVGSVLAEHFPVTSGDTNELDDHLVEI
Sequences:
>Translated_228_residues MAARPVVAVLQEAGETMATRPISPQDHERIADAIRAAETKTDGEIYCVVAHASDGYFAPAALMATLGMLVVSLAVAYGLE AWWLTIRLPHFVIAQLLALACVLALLWAVPGLRIHMVPRRLRYQAAHANAIKQFLARNVHRTTARTGVLIFVSIAERYAE VVADSGIDAKVGQHVWDGVVRDLTAHAGDDRLADGFVKAIEQVGSVLAEHFPVTSGDTNELDDHLVEI >Mature_227_residues AARPVVAVLQEAGETMATRPISPQDHERIADAIRAAETKTDGEIYCVVAHASDGYFAPAALMATLGMLVVSLAVAYGLEA WWLTIRLPHFVIAQLLALACVLALLWAVPGLRIHMVPRRLRYQAAHANAIKQFLARNVHRTTARTGVLIFVSIAERYAEV VADSGIDAKVGQHVWDGVVRDLTAHAGDDRLADGFVKAIEQVGSVLAEHFPVTSGDTNELDDHLVEI
Specific function: Unknown
COG id: COG3762
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24702; Mature: 24571
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARPVVAVLQEAGETMATRPISPQDHERIADAIRAAETKTDGEIYCVVAHASDGYFAPA CCCCHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHH ALMATLGMLVVSLAVAYGLEAWWLTIRLPHFVIAQLLALACVLALLWAVPGLRIHMVPRR HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHH LRYQAAHANAIKQFLARNVHRTTARTGVLIFVSIAERYAEVVADSGIDAKVGQHVWDGVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH RDLTAHAGDDRLADGFVKAIEQVGSVLAEHFPVTSGDTNELDDHLVEI HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC >Mature Secondary Structure AARPVVAVLQEAGETMATRPISPQDHERIADAIRAAETKTDGEIYCVVAHASDGYFAPA CCCHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHH ALMATLGMLVVSLAVAYGLEAWWLTIRLPHFVIAQLLALACVLALLWAVPGLRIHMVPRR HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHH LRYQAAHANAIKQFLARNVHRTTARTGVLIFVSIAERYAEVVADSGIDAKVGQHVWDGVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH RDLTAHAGDDRLADGFVKAIEQVGSVLAEHFPVTSGDTNELDDHLVEI HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA