| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is ygcG [H]
Identifier: 13473505
GI number: 13473505
Start: 3301826
End: 3302710
Strand: Reverse
Name: ygcG [H]
Synonym: mll4127
Alternate gene names: 13473505
Gene position: 3302710-3301826 (Counterclockwise)
Preceding gene: 13473506
Following gene: 13473504
Centisome position: 46.94
GC content: 65.99
Gene sequence:
>885_bases ATGACGACACGCCGCCTGCCGAGGCCCTGCCGTTTCAACCCGACGATCCACGTTGTCCTGGCCGTTCTGGCGCTGCTTTT GTCCGGCTTGGCGGCCTTCGCGGACCTGCCGGCGCTCACCGGCCGCGTCGTCGACGATGCCGGCATCATCGATGCCGGCA CCAGGGCGGCGCTGACGCAGAAGCTCGCGGATTTCGAGAAAAAGGGCTCCGACCAGATCGTCGTCGCCACCATCCCCAGC CTCGGCGGCGAGGAGATCGAGCCCTACGCCAACCGGCTGTTCCGCTTCTGGAAGCTTGGTCAGGCCGGCGAGAACAACGG CGTGCTTCTGCTGGTCGCCAAGAACGACCACAAGATGCGCATCGAGGTCGGCTATGGGCTGGAAGGCACGCTGACCGACC TGCACACCAAACTGATCATCGAAAACGACATGGTGCCGGCGTTCCGCGCCGGCGATTTCTCCGGCGGCATCTCCAAGGCC GTCGACGACATGGTCATGGTGCTGGAAGGCAATCCTGAGGAGCTGGAGGCACGTGGCAAGCGCAATCCCGCCGACAGCAG CACCCCCATCGACCCGATCGTCACGGTGTTCCTGATCCTGTGGGCGACGATGTTCTTCGGCGGCCTGGCCATGGCGTTCC TGCCGCCGATGTTCGGCACCAAGCTGTCGCCGGGCGTGTATAGATGGCTGGGCATGACGTTTCGTTACGGCAAGGGGCCA AGCGGATCCTCGGGCGGCAGTGGCTGGACGACGGGTTCGTCGGGCGGCGGCTGGTCGTCGGGAAGCTCCAGCAGTGGCTG GTCGTCCGGGTCGAGCAGCAGCGGCGGCGGGTTTTCGGGCGGTGGCGGCTCGTCCGGTGGTGGCGGTTCTTCAGGAAGCT GGTGA
Upstream 100 bases:
>100_bases TCCGGCAGTTCCGGCGGCGGCTGGTCTTCGGGCGGTGGTGGCTTTTCCGGCGGCGGCGGCTCGTCCGGCGGCGGCGGCTC CTCGGGAAGCTGGTGACGGC
Downstream 100 bases:
>100_bases GACAATGGCAACACGACCGATCAGCCCGCAGGATCATGAGCGCATCGCCGATGCGATCCGTGCCGCCGAGACCAAAACCG ACGGCGAAATCTACTGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MTTRRLPRPCRFNPTIHVVLAVLALLLSGLAAFADLPALTGRVVDDAGIIDAGTRAALTQKLADFEKKGSDQIVVATIPS LGGEEIEPYANRLFRFWKLGQAGENNGVLLLVAKNDHKMRIEVGYGLEGTLTDLHTKLIIENDMVPAFRAGDFSGGISKA VDDMVMVLEGNPEELEARGKRNPADSSTPIDPIVTVFLILWATMFFGGLAMAFLPPMFGTKLSPGVYRWLGMTFRYGKGP SGSSGGSGWTTGSSGGGWSSGSSSSGWSSGSSSSGGGFSGGGGSSGGGGSSGSW
Sequences:
>Translated_294_residues MTTRRLPRPCRFNPTIHVVLAVLALLLSGLAAFADLPALTGRVVDDAGIIDAGTRAALTQKLADFEKKGSDQIVVATIPS LGGEEIEPYANRLFRFWKLGQAGENNGVLLLVAKNDHKMRIEVGYGLEGTLTDLHTKLIIENDMVPAFRAGDFSGGISKA VDDMVMVLEGNPEELEARGKRNPADSSTPIDPIVTVFLILWATMFFGGLAMAFLPPMFGTKLSPGVYRWLGMTFRYGKGP SGSSGGSGWTTGSSGGGWSSGSSSSGWSSGSSSSGGGFSGGGGSSGGGGSSGSW >Mature_293_residues TTRRLPRPCRFNPTIHVVLAVLALLLSGLAAFADLPALTGRVVDDAGIIDAGTRAALTQKLADFEKKGSDQIVVATIPSL GGEEIEPYANRLFRFWKLGQAGENNGVLLLVAKNDHKMRIEVGYGLEGTLTDLHTKLIIENDMVPAFRAGDFSGGISKAV DDMVMVLEGNPEELEARGKRNPADSSTPIDPIVTVFLILWATMFFGGLAMAFLPPMFGTKLSPGVYRWLGMTFRYGKGPS GSSGGSGWTTGSSGGGWSSGSSSSGWSSGSSSSGGGFSGGGGSSGGGGSSGSW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=173, Percent_Identity=33.5260115606936, Blast_Score=99, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 30558; Mature: 30427
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRRLPRPCRFNPTIHVVLAVLALLLSGLAAFADLPALTGRVVDDAGIIDAGTRAALTQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCHHHHHHH KLADFEKKGSDQIVVATIPSLGGEEIEPYANRLFRFWKLGQAGENNGVLLLVAKNDHKMR HHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEE IEVGYGLEGTLTDLHTKLIIENDMVPAFRAGDFSGGISKAVDDMVMVLEGNPEELEARGK EEECCCCCCHHHHHHEEEEEECCCCCCEECCCCCCCHHHHHHHEEEEECCCHHHHHHCCC RNPADSSTPIDPIVTVFLILWATMFFGGLAMAFLPPMFGTKLSPGVYRWLGMTFRYGKGP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHCCCEEECCCC SGSSGGSGWTTGSSGGGWSSGSSSSGWSSGSSSSGGGFSGGGGSSGGGGSSGSW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTRRLPRPCRFNPTIHVVLAVLALLLSGLAAFADLPALTGRVVDDAGIIDAGTRAALTQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCHHHHHHH KLADFEKKGSDQIVVATIPSLGGEEIEPYANRLFRFWKLGQAGENNGVLLLVAKNDHKMR HHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEE IEVGYGLEGTLTDLHTKLIIENDMVPAFRAGDFSGGISKAVDDMVMVLEGNPEELEARGK EEECCCCCCHHHHHHEEEEEECCCCCCEECCCCCCCHHHHHHHEEEEECCCHHHHHHCCC RNPADSSTPIDPIVTVFLILWATMFFGGLAMAFLPPMFGTKLSPGVYRWLGMTFRYGKGP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHCCCEEECCCC SGSSGGSGWTTGSSGGGWSSGSSSSGWSSGSSSSGGGFSGGGGSSGGGGSSGSW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]