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The map label for this gene is ugpA [H]

Identifier: 13473023

GI number: 13473023

Start: 2823987

End: 2824871

Strand: Reverse

Name: ugpA [H]

Synonym: mll3502

Alternate gene names: 13473023

Gene position: 2824871-2823987 (Counterclockwise)

Preceding gene: 13473024

Following gene: 13473022

Centisome position: 40.15

GC content: 61.24

Gene sequence:

>885_bases
ATGGAAAAACGCGTCACTTTCGGCAAATGGACGATCGGCATCCTTTTCGCGGTGCCGCAGCTCCTCCTGATCTTCACTTT
CTTCTACTGGCCGGCCGGCCAGGCCGTGTACTGGTCGCTGACGCTGCAGCAACCCTGGGGCGGCGGCAACATCTGGGTCG
GGCTCGACAATTTCCGCTCCATCCTGTCCAACGCCGACTACTGGAACTCGATCACCGCCAGCCTTGTCTTTGCAGGCATC
AGCACCGGTCTTGCGATGTTCATCGCACTGGTGCTCGCGGCCTTGACCGACCGGCAGCTCGCCGGCTCACGGCTCTACCG
CGTCGTGCTGATCTGGCCCTACGGCATCGCGGCACCCGCGCTGGCGATGGCATTCCGCTTCATCCTGGCGCCGGAGGCCG
GCTTCATGGCCGTGGTCAACCGGGTCTGGCCCGGCTTCTGGGACCCCGGCCTCGACGGCGCTGACGCCATGGCTTCGATC
ATCGTTGCCTTTTCGTGGAAATATGTCGGCTACAACTTCATCTTCTTCCTCGCAGCGTTCCAGGCCATCCCGCGTTCGCT
GATCGAGGCGGCGGCCATGGACGGTTCCGGCGTCATCAGGCGCTTCTGGGACATACAGTTCCCGCTGATCACGCCGACCA
TCTTCTTCCTGCTGGTCATCAACATCACCGAGAGTTTTCAGGACTCCTTCGGCATCGTCGACATCATGACCGCTGGCGGT
CCGGCCAACGCCACCAATCTGATGGTCTACAAGATCTATTCCGACGGCTTCAAAGGCCTCGATTATTCAGGCGCCGCCGC
GCAGAGCATCATCCTGATGCTGCTCATCGTCGTGCTCACCATCTTCCAGTTCCGCTTCATCGAGCGGCGCGTGCACTACA
GGTAA

Upstream 100 bases:

>100_bases
GAAACGTCAAGGCCGCCCGCCGAGATTCGACGGGCGGCCATTTCATATCTAGTCTTCCGCTGAGAAAGCGGGCTGACGGT
TCAATGGCATCGGCGGATCG

Downstream 100 bases:

>100_bases
GATGGATATGGTTGAGCGCACCCCGTTCCTCAATTTCTTCACGCATCTGATCCTGTTCATCGGCTTCGTCTTTTGCATCG
CGCCGTTCGTGGTCGTGGCG

Product: ugpA, sn-glycerol-3-phosphate transport system permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MEKRVTFGKWTIGILFAVPQLLLIFTFFYWPAGQAVYWSLTLQQPWGGGNIWVGLDNFRSILSNADYWNSITASLVFAGI
STGLAMFIALVLAALTDRQLAGSRLYRVVLIWPYGIAAPALAMAFRFILAPEAGFMAVVNRVWPGFWDPGLDGADAMASI
IVAFSWKYVGYNFIFFLAAFQAIPRSLIEAAAMDGSGVIRRFWDIQFPLITPTIFFLLVINITESFQDSFGIVDIMTAGG
PANATNLMVYKIYSDGFKGLDYSGAAAQSIILMLLIVVLTIFQFRFIERRVHYR

Sequences:

>Translated_294_residues
MEKRVTFGKWTIGILFAVPQLLLIFTFFYWPAGQAVYWSLTLQQPWGGGNIWVGLDNFRSILSNADYWNSITASLVFAGI
STGLAMFIALVLAALTDRQLAGSRLYRVVLIWPYGIAAPALAMAFRFILAPEAGFMAVVNRVWPGFWDPGLDGADAMASI
IVAFSWKYVGYNFIFFLAAFQAIPRSLIEAAAMDGSGVIRRFWDIQFPLITPTIFFLLVINITESFQDSFGIVDIMTAGG
PANATNLMVYKIYSDGFKGLDYSGAAAQSIILMLLIVVLTIFQFRFIERRVHYR
>Mature_294_residues
MEKRVTFGKWTIGILFAVPQLLLIFTFFYWPAGQAVYWSLTLQQPWGGGNIWVGLDNFRSILSNADYWNSITASLVFAGI
STGLAMFIALVLAALTDRQLAGSRLYRVVLIWPYGIAAPALAMAFRFILAPEAGFMAVVNRVWPGFWDPGLDGADAMASI
IVAFSWKYVGYNFIFFLAAFQAIPRSLIEAAAMDGSGVIRRFWDIQFPLITPTIFFLLVINITESFQDSFGIVDIMTAGG
PANATNLMVYKIYSDGFKGLDYSGAAAQSIILMLLIVVLTIFQFRFIERRVHYR

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=293, Percent_Identity=40.6143344709898, Blast_Score=229, Evalue=2e-61,
Organism=Escherichia coli, GI1790465, Length=285, Percent_Identity=28.0701754385965, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787570, Length=228, Percent_Identity=24.5614035087719, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32818; Mature: 32818

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKRVTFGKWTIGILFAVPQLLLIFTFFYWPAGQAVYWSLTLQQPWGGGNIWVGLDNFRS
CCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEEHHHHHH
ILSNADYWNSITASLVFAGISTGLAMFIALVLAALTDRQLAGSRLYRVVLIWPYGIAAPA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHHHHH
LAMAFRFILAPEAGFMAVVNRVWPGFWDPGLDGADAMASIIVAFSWKYVGYNFIFFLAAF
HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAIPRSLIEAAAMDGSGVIRRFWDIQFPLITPTIFFLLVINITESFQDSFGIVDIMTAGG
HHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
PANATNLMVYKIYSDGFKGLDYSGAAAQSIILMLLIVVLTIFQFRFIERRVHYR
CCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEKRVTFGKWTIGILFAVPQLLLIFTFFYWPAGQAVYWSLTLQQPWGGGNIWVGLDNFRS
CCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEEHHHHHH
ILSNADYWNSITASLVFAGISTGLAMFIALVLAALTDRQLAGSRLYRVVLIWPYGIAAPA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHHHHH
LAMAFRFILAPEAGFMAVVNRVWPGFWDPGLDGADAMASIIVAFSWKYVGYNFIFFLAAF
HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAIPRSLIEAAAMDGSGVIRRFWDIQFPLITPTIFFLLVINITESFQDSFGIVDIMTAGG
HHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
PANATNLMVYKIYSDGFKGLDYSGAAAQSIILMLLIVVLTIFQFRFIERRVHYR
CCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]