Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13472356
Identifier: 13472356
GI number: 13472356
Start: 2120885
End: 2122141
Strand: Direct
Name: 13472356
Synonym: mlr2623
Alternate gene names: NA
Gene position: 2120885-2122141 (Clockwise)
Preceding gene: 13472353
Following gene: 13472361
Centisome position: 30.14
GC content: 63.48
Gene sequence:
>1257_bases ATGAACCGACTTTCAAGCCTGCTGGCATCCGCATTCATTCTGCTCGTGCCGCTGTCTTCGGCGCACGCCGCTATGCCCGA AGCGGCAACCGCGCTTTTCGATGCGAAGACCGTGGCCGCGCGCGACAGCGCTCTGTCGACCCTGGAGGCGGCCGCACCGA AAGACCCGGCATCGGCCTATGCCGCCGGCGCCGGAGAATTCTTCACCGCACTTGAACTGCTCGCCAGCGGCCTGCACCGT CACGGTTTCGAAAGCCCGCAATCCTTCATGCTGCCGCTGATGCAGCTGCCGGTTCCCTCTAATCCCAATCCCGAGCCACT GACCTACGAAGAGTTCCGCGCCATATTGGTCACCTTCCGCGACAGGCTGGCAAAATCCGCCGCGACGCTGGGTTCGGTGC CGGCCGATGCCGATATCGGCATGGTCATCGACCTTACCCATGTCGGCATCGACCTCAACGAGGACGGCACGATCGCGCCG GACGAAAGCATGGCGGCCATCATGGCCGCGCTGTCGCACGGCAGCATTTCGCAGGGCGATACCGCACCGGTGCTGACCTT CCGTTTCGACCGCGCCGACGGCTATTGGCTGCAGGGCTATGCCGAGTTCCTGATGGCGCAGGCCGATTTCTGGCTGGCGC ATGATTTCAGAGGTACTTTCGACGGCTCCTTCCACATGCTGTTCCCGCGCGCCAAGCTGCCATTGCAGGATATTCTCGTG CCGCCGCCCAGCGAGATGGGCTCGAGCATCTTCTCCTCGGAATGGCGCATCGCCGATTTCATCTCGATGGTGCACATGAT CAACTGGCCGGTGGTCGAGCCGGAGCGCCGCAAGGCGGCACGCCAGGAATTGCTCGAAATGATCCGGCTGTCCCGCGAAG ACTGGAAAGCGATCCGCGCCGAGACCGACAATGACCGCGAATGGCTGCCCGGGCCGCAGCAGAAGGGCGAGAACCCGCTG ACCGGCCTCGAAGTCGGCGAGGAGCAGGTGCAGGCCTGGCTCGCCACCTTGAGCCTGGCCGAGGACCTGCTCGAAGGCCG CGCGCTGCTGCCGCATTTCCGCGTCACCGGCAAAGGCATCAACATGAAGCGCTTCTTCGACGAGCCGAAGCCTTTCGACC TGGTGCTGTCGATCACCGGCCCTGGCATCGCGCCCTATCTCGAAAGCGGCAGGATCCTGACTAGCGAGGATTTCGACCAG ATCCAGCGCGAATTCGGCGGCGGCGGGTTTTTGACGTTCGCGCTGTGGTTTAACTGA
Upstream 100 bases:
>100_bases CATCTTGGATCATGGCCCGCCCGGCCACATCGATGCCGACAGGCGCGACGCCGCAAAACGTGTATATTTGCTCCGCGCGA CACAGATATCGGGGGAGACG
Downstream 100 bases:
>100_bases GCGGCCTATCAGAACTTGGGTCCCTGCCCTCGCCAGGCGGGGAAAGGACCCAGGTTCGCCGGGTCCGCCAGCAATTGCGG GAAAATCGTGAAACGGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MNRLSSLLASAFILLVPLSSAHAAMPEAATALFDAKTVAARDSALSTLEAAAPKDPASAYAAGAGEFFTALELLASGLHR HGFESPQSFMLPLMQLPVPSNPNPEPLTYEEFRAILVTFRDRLAKSAATLGSVPADADIGMVIDLTHVGIDLNEDGTIAP DESMAAIMAALSHGSISQGDTAPVLTFRFDRADGYWLQGYAEFLMAQADFWLAHDFRGTFDGSFHMLFPRAKLPLQDILV PPPSEMGSSIFSSEWRIADFISMVHMINWPVVEPERRKAARQELLEMIRLSREDWKAIRAETDNDREWLPGPQQKGENPL TGLEVGEEQVQAWLATLSLAEDLLEGRALLPHFRVTGKGINMKRFFDEPKPFDLVLSITGPGIAPYLESGRILTSEDFDQ IQREFGGGGFLTFALWFN
Sequences:
>Translated_418_residues MNRLSSLLASAFILLVPLSSAHAAMPEAATALFDAKTVAARDSALSTLEAAAPKDPASAYAAGAGEFFTALELLASGLHR HGFESPQSFMLPLMQLPVPSNPNPEPLTYEEFRAILVTFRDRLAKSAATLGSVPADADIGMVIDLTHVGIDLNEDGTIAP DESMAAIMAALSHGSISQGDTAPVLTFRFDRADGYWLQGYAEFLMAQADFWLAHDFRGTFDGSFHMLFPRAKLPLQDILV PPPSEMGSSIFSSEWRIADFISMVHMINWPVVEPERRKAARQELLEMIRLSREDWKAIRAETDNDREWLPGPQQKGENPL TGLEVGEEQVQAWLATLSLAEDLLEGRALLPHFRVTGKGINMKRFFDEPKPFDLVLSITGPGIAPYLESGRILTSEDFDQ IQREFGGGGFLTFALWFN >Mature_418_residues MNRLSSLLASAFILLVPLSSAHAAMPEAATALFDAKTVAARDSALSTLEAAAPKDPASAYAAGAGEFFTALELLASGLHR HGFESPQSFMLPLMQLPVPSNPNPEPLTYEEFRAILVTFRDRLAKSAATLGSVPADADIGMVIDLTHVGIDLNEDGTIAP DESMAAIMAALSHGSISQGDTAPVLTFRFDRADGYWLQGYAEFLMAQADFWLAHDFRGTFDGSFHMLFPRAKLPLQDILV PPPSEMGSSIFSSEWRIADFISMVHMINWPVVEPERRKAARQELLEMIRLSREDWKAIRAETDNDREWLPGPQQKGENPL TGLEVGEEQVQAWLATLSLAEDLLEGRALLPHFRVTGKGINMKRFFDEPKPFDLVLSITGPGIAPYLESGRILTSEDFDQ IQREFGGGGFLTFALWFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45938; Mature: 45938
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLSSLLASAFILLVPLSSAHAAMPEAATALFDAKTVAARDSALSTLEAAAPKDPASAY CCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH AAGAGEFFTALELLASGLHRHGFESPQSFMLPLMQLPVPSNPNPEPLTYEEFRAILVTFR HCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH DRLAKSAATLGSVPADADIGMVIDLTHVGIDLNEDGTIAPDESMAAIMAALSHGSISQGD HHHHHHHHHHCCCCCCCCCCEEEEEEEECEEECCCCCCCCCHHHHHHHHHHHCCCCCCCC TAPVLTFRFDRADGYWLQGYAEFLMAQADFWLAHDFRGTFDGSFHMLFPRAKLPLQDILV CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEECCCCCCCHHHCCC PPPSEMGSSIFSSEWRIADFISMVHMINWPVVEPERRKAARQELLEMIRLSREDWKAIRA CCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHC ETDNDREWLPGPQQKGENPLTGLEVGEEQVQAWLATLSLAEDLLEGRALLPHFRVTGKGI CCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC NMKRFFDEPKPFDLVLSITGPGIAPYLESGRILTSEDFDQIQREFGGGGFLTFALWFN CHHHHCCCCCCEEEEEEECCCCCCHHHHCCEEECCHHHHHHHHHHCCCEEEEEEEEEC >Mature Secondary Structure MNRLSSLLASAFILLVPLSSAHAAMPEAATALFDAKTVAARDSALSTLEAAAPKDPASAY CCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH AAGAGEFFTALELLASGLHRHGFESPQSFMLPLMQLPVPSNPNPEPLTYEEFRAILVTFR HCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH DRLAKSAATLGSVPADADIGMVIDLTHVGIDLNEDGTIAPDESMAAIMAALSHGSISQGD HHHHHHHHHHCCCCCCCCCCEEEEEEEECEEECCCCCCCCCHHHHHHHHHHHCCCCCCCC TAPVLTFRFDRADGYWLQGYAEFLMAQADFWLAHDFRGTFDGSFHMLFPRAKLPLQDILV CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEECCCCCCCHHHCCC PPPSEMGSSIFSSEWRIADFISMVHMINWPVVEPERRKAARQELLEMIRLSREDWKAIRA CCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHC ETDNDREWLPGPQQKGENPLTGLEVGEEQVQAWLATLSLAEDLLEGRALLPHFRVTGKGI CCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC NMKRFFDEPKPFDLVLSITGPGIAPYLESGRILTSEDFDQIQREFGGGGFLTFALWFN CHHHHCCCCCCEEEEEEECCCCCCHHHHCCEEECCHHHHHHHHHHCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA