Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
---|---|
Accession | NC_002678 |
Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13472361
Identifier: 13472361
GI number: 13472361
Start: 2127647
End: 2129278
Strand: Direct
Name: 13472361
Synonym: mlr2630
Alternate gene names: NA
Gene position: 2127647-2129278 (Clockwise)
Preceding gene: 13472356
Following gene: 13472362
Centisome position: 30.24
GC content: 68.57
Gene sequence:
>1632_bases ATGGCGTTGTCGAGTAAACACAAAATAATCCGGGACCAGCGCGAGGGCGGCGAGTTCGTCGATGCGCAGCGCACCCCTTC CTTCAACCCGAAACGGATCGTCCGCTGGGTCGCGGTGCCCGGTGCCAGCGCCGCTGTCGGCCTCTGGCTGATCGGCACCA TGGCTGGCCTCAGCTCCGTCGGCGCCTCGCTGTCGGCGACATCGAGCGGCCTGCCGCAGACGCTGGCCATGCCGGGCTCG CTGGCAATGGCCGATCCGCTGAAACAGCACTTCCTCAGATCTTCGGCGCCGTTCGTGCTGGCCAATGCCCATGGCGGCAC TCAGGCCCTGCATGACCATGCCGTGCAATGCGGCGCCACTTGCTTCAAGCTGGCCAGAGTGAGCCCACTGGGTGAGAAAT CCGCACGCCTGGCGGCCCATGCAAGGCCGGAACAGCCAATCTTGAAGTCGAAGGCACAGGAGCGCTTCGAACGCATGGAG GCGTCGCTGTCGCCGACCAAGCTCGCCGCCGCCTTTGCCGGCGCCGGCAAGCCCGACGCCACGGCCGACGCCCGCCCGAT GATTTCCCAGGCCGCGCCGCAGATTACCGAGGCGTCGCTGGTTCCGTCAGTCCAGGTGGTGGCCAGCCTGTCGAACGATT TGCCGGCTCCGGCGGCGGAACGCTTCGCCCGTGCCGATACCGGCGCCGTCGTCCAGACCGCGCCGCCGCCGGCGGGCCTT GCCCAGTCGCAGACGCCTGACAACACGCAGCTGGCACTGGCCCTCGTCCAGTCACTGCCGGTCGAGGACGAAGCATTCGC CTCGCCGCTGCCGATGACCGAATCCTCTGCCGACGTCGCGATTGCACCTGCCGAGACCCAGCCGCAACAGCCCGGCGACG CCGCCTCGCTGCCGGATGCGCTGACCGACGACGTGCCGCTGCCGACTGGCCGCCCGCAATACGACACGCCGCGGCAGCCA AAGGCCGTGGTGGAACAGGATGAGCCGGCGCCGCAGCCCAAGATTGCTCAGCCCAAGATCGCGCAGCAGAAACCGGCGCC GCAGGCAAAGCCGGTCCAGCAGGCCCAGCCCGCAAGACCGGCCCGGGCCGGCCGGTCTGGCGAGAGCGGCGATGTGCTGG CCTATGCCAAGCCGGACATGCCGTCGGGCGGCCTTGGCCAGGCGTTCAGGAACCTCTTCAATGGACCGGGCGGCGGAAGC GGCGCCGGCCGCGGCGTCGCCGTCTATGACATCAGCGCCAAGACCGTCTACATGCCGGATGGCCAGCGGCTCGAGGCGCA TTCCGGCCTCGGCGCCATGGTCGATCAGCCGCGCTATGTCCATGTGAAGGATCGTGGCCCGACGCCGCCCAACACCTATA ATCTGTCGCTGCGTGAATCGCGCTTCCATGGCGTCGAGGCCCTGCGCCTGACCCCGGTCGGCGGTGGCAACAAATACAAC CGCAACGGCCTGCTCGCCCACACCTACATGCTGCGCGGCGGCCGCGCCGAGTCCAATGGCTGCGTCGTTTTCAGGGACTA TTCCCGCTTCCTCGCCGCCTTCAAGAAGGGCAAGGTCACGCGTCTCGTCGTCGTGCCGCGCCTGAGCGGATCGCCGACCC AAGTGGCGACGGACAACGCCCGCGGCGCCTGA
Upstream 100 bases:
>100_bases GGCAAACGCGTCGGGGACCACCCTGGGATCACTCGCAGAATGGTCGTCGCGGCTGACAAGGCCACGTACGGGGAAAACCG ATTGGAGCGAGATTGGTTGC
Downstream 100 bases:
>100_bases CCGCCGGCAGATACCCCTCGGCAACTGCCTCCTCCTGACAGCCTTCTGTCAGGAGCCGCGTCGGGGCATGCGCCTCGCCG CATCGCGCTCTTTCCATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 543; Mature: 542
Protein sequence:
>543_residues MALSSKHKIIRDQREGGEFVDAQRTPSFNPKRIVRWVAVPGASAAVGLWLIGTMAGLSSVGASLSATSSGLPQTLAMPGS LAMADPLKQHFLRSSAPFVLANAHGGTQALHDHAVQCGATCFKLARVSPLGEKSARLAAHARPEQPILKSKAQERFERME ASLSPTKLAAAFAGAGKPDATADARPMISQAAPQITEASLVPSVQVVASLSNDLPAPAAERFARADTGAVVQTAPPPAGL AQSQTPDNTQLALALVQSLPVEDEAFASPLPMTESSADVAIAPAETQPQQPGDAASLPDALTDDVPLPTGRPQYDTPRQP KAVVEQDEPAPQPKIAQPKIAQQKPAPQAKPVQQAQPARPARAGRSGESGDVLAYAKPDMPSGGLGQAFRNLFNGPGGGS GAGRGVAVYDISAKTVYMPDGQRLEAHSGLGAMVDQPRYVHVKDRGPTPPNTYNLSLRESRFHGVEALRLTPVGGGNKYN RNGLLAHTYMLRGGRAESNGCVVFRDYSRFLAAFKKGKVTRLVVVPRLSGSPTQVATDNARGA
Sequences:
>Translated_543_residues MALSSKHKIIRDQREGGEFVDAQRTPSFNPKRIVRWVAVPGASAAVGLWLIGTMAGLSSVGASLSATSSGLPQTLAMPGS LAMADPLKQHFLRSSAPFVLANAHGGTQALHDHAVQCGATCFKLARVSPLGEKSARLAAHARPEQPILKSKAQERFERME ASLSPTKLAAAFAGAGKPDATADARPMISQAAPQITEASLVPSVQVVASLSNDLPAPAAERFARADTGAVVQTAPPPAGL AQSQTPDNTQLALALVQSLPVEDEAFASPLPMTESSADVAIAPAETQPQQPGDAASLPDALTDDVPLPTGRPQYDTPRQP KAVVEQDEPAPQPKIAQPKIAQQKPAPQAKPVQQAQPARPARAGRSGESGDVLAYAKPDMPSGGLGQAFRNLFNGPGGGS GAGRGVAVYDISAKTVYMPDGQRLEAHSGLGAMVDQPRYVHVKDRGPTPPNTYNLSLRESRFHGVEALRLTPVGGGNKYN RNGLLAHTYMLRGGRAESNGCVVFRDYSRFLAAFKKGKVTRLVVVPRLSGSPTQVATDNARGA >Mature_542_residues ALSSKHKIIRDQREGGEFVDAQRTPSFNPKRIVRWVAVPGASAAVGLWLIGTMAGLSSVGASLSATSSGLPQTLAMPGSL AMADPLKQHFLRSSAPFVLANAHGGTQALHDHAVQCGATCFKLARVSPLGEKSARLAAHARPEQPILKSKAQERFERMEA SLSPTKLAAAFAGAGKPDATADARPMISQAAPQITEASLVPSVQVVASLSNDLPAPAAERFARADTGAVVQTAPPPAGLA QSQTPDNTQLALALVQSLPVEDEAFASPLPMTESSADVAIAPAETQPQQPGDAASLPDALTDDVPLPTGRPQYDTPRQPK AVVEQDEPAPQPKIAQPKIAQQKPAPQAKPVQQAQPARPARAGRSGESGDVLAYAKPDMPSGGLGQAFRNLFNGPGGGSG AGRGVAVYDISAKTVYMPDGQRLEAHSGLGAMVDQPRYVHVKDRGPTPPNTYNLSLRESRFHGVEALRLTPVGGGNKYNR NGLLAHTYMLRGGRAESNGCVVFRDYSRFLAAFKKGKVTRLVVVPRLSGSPTQVATDNARGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56808; Mature: 56677
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSSKHKIIRDQREGGEFVDAQRTPSFNPKRIVRWVAVPGASAAVGLWLIGTMAGLSSV CCCCCCHHHHHHHHCCCCEECCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHHHH GASLSATSSGLPQTLAMPGSLAMADPLKQHFLRSSAPFVLANAHGGTQALHDHAVQCGAT CCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH CFKLARVSPLGEKSARLAAHARPEQPILKSKAQERFERMEASLSPTKLAAAFAGAGKPDA HHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC TADARPMISQAAPQITEASLVPSVQVVASLSNDLPAPAAERFARADTGAVVQTAPPPAGL CCCCCHHHHHHCCCHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHCCCCCEEECCCCCCCC AQSQTPDNTQLALALVQSLPVEDEAFASPLPMTESSADVAIAPAETQPQQPGDAASLPDA CCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCH LTDDVPLPTGRPQYDTPRQPKAVVEQDEPAPQPKIAQPKIAQQKPAPQAKPVQQAQPARP HCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCCC ARAGRSGESGDVLAYAKPDMPSGGLGQAFRNLFNGPGGGSGAGRGVAVYDISAKTVYMPD HHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCEEEECCC GQRLEAHSGLGAMVDQPRYVHVKDRGPTPPNTYNLSLRESRFHGVEALRLTPVGGGNKYN CCEEECCCCCCHHHCCCCEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCC RNGLLAHTYMLRGGRAESNGCVVFRDYSRFLAAFKKGKVTRLVVVPRLSGSPTQVATDNA CCCEEEEEEEEECCCCCCCCEEEEHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEECCCC RGA CCC >Mature Secondary Structure ALSSKHKIIRDQREGGEFVDAQRTPSFNPKRIVRWVAVPGASAAVGLWLIGTMAGLSSV CCCCCHHHHHHHHCCCCEECCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHHHH GASLSATSSGLPQTLAMPGSLAMADPLKQHFLRSSAPFVLANAHGGTQALHDHAVQCGAT CCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH CFKLARVSPLGEKSARLAAHARPEQPILKSKAQERFERMEASLSPTKLAAAFAGAGKPDA HHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC TADARPMISQAAPQITEASLVPSVQVVASLSNDLPAPAAERFARADTGAVVQTAPPPAGL CCCCCHHHHHHCCCHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHCCCCCEEECCCCCCCC AQSQTPDNTQLALALVQSLPVEDEAFASPLPMTESSADVAIAPAETQPQQPGDAASLPDA CCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCH LTDDVPLPTGRPQYDTPRQPKAVVEQDEPAPQPKIAQPKIAQQKPAPQAKPVQQAQPARP HCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCCC ARAGRSGESGDVLAYAKPDMPSGGLGQAFRNLFNGPGGGSGAGRGVAVYDISAKTVYMPD HHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCEEEECCC GQRLEAHSGLGAMVDQPRYVHVKDRGPTPPNTYNLSLRESRFHGVEALRLTPVGGGNKYN CCEEECCCCCCHHHCCCCEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCC RNGLLAHTYMLRGGRAESNGCVVFRDYSRFLAAFKKGKVTRLVVVPRLSGSPTQVATDNA CCCEEEEEEEEECCCCCCCCEEEEHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEECCCC RGA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA