| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is fabG [H]
Identifier: 13472291
GI number: 13472291
Start: 2054869
End: 2055657
Strand: Direct
Name: fabG [H]
Synonym: mlr2535
Alternate gene names: 13472291
Gene position: 2054869-2055657 (Clockwise)
Preceding gene: 13472290
Following gene: 13472296
Centisome position: 29.2
GC content: 66.29
Gene sequence:
>789_bases ATGACCATCAAAGCTGATCCGATCGAGTTCGCGGGAAAGCGTGTGCTCATCAGCGGCGGCACCAAGGGTCTGGGCCGCGC CACCGTTGACCGCTTCCTTGCCGGCGGCGCCCGAGTGATCACCTCCGCCCGCGGAGCCCTAGATCCCGTTGATGGTGTCG AGTTCGTCCAGGCGGACCTGACGACGGCCGAGGGCGGCGAAGCCCTGGCCAAGGCGGCGCTCGATCGTCTGGGGGGCGTC GACATTCTCGCCCATGTGCTCGGCGGCTCGACCACGCCAGGCGGCGGCTTCGTCGCCTTGACCGACGACTACTGGCTATC CGAACTGAACTTAAACCTGCTGGCCACGGTTCGTCTTGATCGTCTCCTGATCCCGCAGATGATCGCGCGGGGCGCCGGCG CGGTGGTGCATGTCACCTCCATCCAGTCCGTCCTGCCGCTTCCCGAGGCAACCACTGCGTACGCCGCCGCCAAGGCCGCA CTCCGGACCTACAGCAAGTCGATTTCCAAGGAACTGGGGCCGAAGGGCGTGCGGGTCAACGCCGTGTCCCCCGGTTGGAT CATGACCGAGGGGACCGAGGTGTTTTTGGAACGTATCCAAGCCGCCAACGGCGGCACGCTAGAGGACGCGCGCCAGCTCG TCCTGGACGGCCTTGGCGGCATTGCCATCGGACGCGGAGCCGAACCATTCGAGGTCGCCGAAGCCATCGCCTTCCTGGCC TCGGATCGCGCCTCTTCGATCCATGGTTCGGAACTCGTCGTCGACGGCGGCACGGTCCCGACTGTCTGA
Upstream 100 bases:
>100_bases TCGAAGGGCCGGCCCATGGCGACTTCAAGGGTAGCCCGATCCGCTTCACCTACCGCTTCACGCTCGAAAATGACGCCATC AAAGCTCTGGAGATCACGGC
Downstream 100 bases:
>100_bases TCGCACGGACATGTCCACGCTTGGCCGGTCCTGCCATGCGTGGCCAGACGCATACCATGGCCGGATTGTCCCAACGTCTG CTCGGCGGCCTTGGAGCGAA
Product: short chain dehydrogenase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MTIKADPIEFAGKRVLISGGTKGLGRATVDRFLAGGARVITSARGALDPVDGVEFVQADLTTAEGGEALAKAALDRLGGV DILAHVLGGSTTPGGGFVALTDDYWLSELNLNLLATVRLDRLLIPQMIARGAGAVVHVTSIQSVLPLPEATTAYAAAKAA LRTYSKSISKELGPKGVRVNAVSPGWIMTEGTEVFLERIQAANGGTLEDARQLVLDGLGGIAIGRGAEPFEVAEAIAFLA SDRASSIHGSELVVDGGTVPTV
Sequences:
>Translated_262_residues MTIKADPIEFAGKRVLISGGTKGLGRATVDRFLAGGARVITSARGALDPVDGVEFVQADLTTAEGGEALAKAALDRLGGV DILAHVLGGSTTPGGGFVALTDDYWLSELNLNLLATVRLDRLLIPQMIARGAGAVVHVTSIQSVLPLPEATTAYAAAKAA LRTYSKSISKELGPKGVRVNAVSPGWIMTEGTEVFLERIQAANGGTLEDARQLVLDGLGGIAIGRGAEPFEVAEAIAFLA SDRASSIHGSELVVDGGTVPTV >Mature_261_residues TIKADPIEFAGKRVLISGGTKGLGRATVDRFLAGGARVITSARGALDPVDGVEFVQADLTTAEGGEALAKAALDRLGGVD ILAHVLGGSTTPGGGFVALTDDYWLSELNLNLLATVRLDRLLIPQMIARGAGAVVHVTSIQSVLPLPEATTAYAAAKAAL RTYSKSISKELGPKGVRVNAVSPGWIMTEGTEVFLERIQAANGGTLEDARQLVLDGLGGIAIGRGAEPFEVAEAIAFLAS DRASSIHGSELVVDGGTVPTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=266, Percent_Identity=30.4511278195489, Blast_Score=101, Evalue=6e-22, Organism=Homo sapiens, GI7705925, Length=255, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI66933014, Length=231, Percent_Identity=28.1385281385281, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI5031737, Length=258, Percent_Identity=29.4573643410853, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI126723750, Length=267, Percent_Identity=26.5917602996255, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI59889578, Length=242, Percent_Identity=29.3388429752066, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI40254992, Length=256, Percent_Identity=28.90625, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI20149619, Length=238, Percent_Identity=28.9915966386555, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI126723191, Length=190, Percent_Identity=28.9473684210526, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI33667109, Length=196, Percent_Identity=31.6326530612245, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI19923817, Length=266, Percent_Identity=24.4360902255639, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI226371731, Length=209, Percent_Identity=26.7942583732057, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI87082100, Length=259, Percent_Identity=30.1158301158301, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1787335, Length=257, Percent_Identity=30.3501945525292, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1786812, Length=271, Percent_Identity=30.2583025830258, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI1789378, Length=253, Percent_Identity=28.4584980237154, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI87082160, Length=269, Percent_Identity=27.5092936802974, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI1788459, Length=206, Percent_Identity=31.5533980582524, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1787905, Length=267, Percent_Identity=27.7153558052434, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1790717, Length=267, Percent_Identity=25.8426966292135, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI2367175, Length=263, Percent_Identity=29.277566539924, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI2367365, Length=256, Percent_Identity=28.515625, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17563726, Length=268, Percent_Identity=32.8358208955224, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17560676, Length=261, Percent_Identity=32.9501915708812, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI72000259, Length=273, Percent_Identity=30.4029304029304, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17562990, Length=267, Percent_Identity=31.4606741573034, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17538480, Length=270, Percent_Identity=31.4814814814815, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17560332, Length=269, Percent_Identity=31.2267657992565, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17562904, Length=274, Percent_Identity=31.3868613138686, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17559104, Length=269, Percent_Identity=31.5985130111524, Blast_Score=97, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17562910, Length=271, Percent_Identity=32.4723247232472, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17544670, Length=275, Percent_Identity=30.5454545454545, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17562906, Length=267, Percent_Identity=29.9625468164794, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17561402, Length=260, Percent_Identity=26.9230769230769, Blast_Score=95, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17531453, Length=265, Percent_Identity=30.9433962264151, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17560150, Length=270, Percent_Identity=30, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17551412, Length=273, Percent_Identity=30.03663003663, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17565030, Length=274, Percent_Identity=29.5620437956204, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17562908, Length=265, Percent_Identity=28.3018867924528, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17538486, Length=270, Percent_Identity=28.5185185185185, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI71994604, Length=265, Percent_Identity=28.6792452830189, Blast_Score=88, Evalue=6e-18, Organism=Caenorhabditis elegans, GI193204405, Length=266, Percent_Identity=29.6992481203008, Blast_Score=87, Evalue=9e-18, Organism=Caenorhabditis elegans, GI71994600, Length=257, Percent_Identity=29.1828793774319, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17555706, Length=262, Percent_Identity=28.2442748091603, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17560220, Length=273, Percent_Identity=27.8388278388278, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI25147288, Length=257, Percent_Identity=27.2373540856031, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI23397609, Length=261, Percent_Identity=29.5019157088123, Blast_Score=97, Evalue=8e-21, Organism=Drosophila melanogaster, GI24644339, Length=265, Percent_Identity=30.5660377358491, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI21357041, Length=203, Percent_Identity=34.4827586206897, Blast_Score=91, Evalue=9e-19, Organism=Drosophila melanogaster, GI28571526, Length=264, Percent_Identity=31.8181818181818, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24643142, Length=259, Percent_Identity=30.5019305019305, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI21358495, Length=196, Percent_Identity=29.0816326530612, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI21355319, Length=260, Percent_Identity=26.9230769230769, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24644337, Length=125, Percent_Identity=40, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24639444, Length=261, Percent_Identity=27.9693486590038, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26881; Mature: 26750
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKADPIEFAGKRVLISGGTKGLGRATVDRFLAGGARVITSARGALDPVDGVEFVQADL CCCCCCCHHHCCCEEEEECCCCCCHHHHHHHHHCCCHHEEHHCCCCCCCCCCHHHHHHHC TTAEGGEALAKAALDRLGGVDILAHVLGGSTTPGGGFVALTDDYWLSELNLNLLATVRLD CCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEECCHHHHHCCCEEEEEHHHH RLLIPQMIARGAGAVVHVTSIQSVLPLPEATTAYAAAKAALRTYSKSISKELGPKGVRVN HHHHHHHHHCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE AVSPGWIMTEGTEVFLERIQAANGGTLEDARQLVLDGLGGIAIGRGAEPFEVAEAIAFLA EECCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHH SDRASSIHGSELVVDGGTVPTV HCCCCCCCCCEEEECCCCCCCC >Mature Secondary Structure TIKADPIEFAGKRVLISGGTKGLGRATVDRFLAGGARVITSARGALDPVDGVEFVQADL CCCCCCHHHCCCEEEEECCCCCCHHHHHHHHHCCCHHEEHHCCCCCCCCCCHHHHHHHC TTAEGGEALAKAALDRLGGVDILAHVLGGSTTPGGGFVALTDDYWLSELNLNLLATVRLD CCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEECCHHHHHCCCEEEEEHHHH RLLIPQMIARGAGAVVHVTSIQSVLPLPEATTAYAAAKAALRTYSKSISKELGPKGVRVN HHHHHHHHHCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE AVSPGWIMTEGTEVFLERIQAANGGTLEDARQLVLDGLGGIAIGRGAEPFEVAEAIAFLA EECCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHH SDRASSIHGSELVVDGGTVPTV HCCCCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]