Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is aatA [H]
Identifier: 13472296
GI number: 13472296
Start: 2058643
End: 2059845
Strand: Direct
Name: aatA [H]
Synonym: mlr2541
Alternate gene names: 13472296
Gene position: 2058643-2059845 (Clockwise)
Preceding gene: 13472291
Following gene: 13472298
Centisome position: 29.26
GC content: 62.93
Gene sequence:
>1203_bases ATGGCCTTTCTTGCCGACACCCTTTCCCGCGTAAAGCCTTCCGCCACCATCGCGGTGACGCAGAAAGCGCGCGAGCTGAA AAATGCCGGCCGTGACATTATCGGCCTCGGCGCCGGCGAACCGGATTTCGACACGCCCGACAACATCAAGAATGCGGCGA TCGAAGCCATCCGCCGTGGCGAAACCAAGTACCCGCCGGTTTCGGGCATCGTGCCGCTGCGCGAGGCGATCGCAAAAAAA TTCAAGCGTGAGAACAATCTCGACTACAAGCCCGAGCAGACCATTGTCGGCACCGGCGGCAAGCAGATCCTGTTCAATGC CTTCATGGCGACGCTGAACCCCGGCGACGAGGTCATCATCCCCCGCCCCTACTGGGTCAGCTACCCCGAAATGGTGGCGA TCTGCGGCGGCACGTCGGTGTTCGCCGACACCTCGATCGAGAATGGCTTCAAGCTGACGGCCGAAGTGCTGGAAAAGGCG ATCACGCCGAAGACCAAATGGCTGCTGATGAACTCGCCGTCCAACCCGTCGGGCGCGGCCTACACGCAAGCCGAACTGCG CGCGCTGGCCGACGTGCTGTTGAAGCATCCGCATGTCTGGACGCTGACCGACGACATGTACGAGCACCTGACCTATGGCG ACTTCGCCTTCAAGACCATCGCCGAGGTCGAGCCGAAGCTCTATGAGCGCACGCTGACCATGAACGGCGTGTCGAAAGCC TATGCCATGACCGGCTGGCGCATCGGCTATGCCGCGGGTCCCGTCCAGCTGATCAAGGCGATGGACATGATCCAGGGCCA GCAGACCTCGGGCGCCTGCACCATCGCGCAATGGGCTTCCGTCGAGGCGCTCAACGGCCCGCAGGATTTCATCGCCAGGA ACAAGGCGATCTTCCAGGGCCGGCGCGACCTCGTCGTCTCGATGCTCAACCAGGCGCGCGGCATCACGTGCCCGTCGCCG GAAGGCGCCTTCTATGTCTATCCGTCCTGCGCCCAGCTGATCGGCAAGAAGACCAAGGCCGGCAAGGTGATCGACACCGA CGAGGCCTTCTGTTCGGAACTGCTCGAGGCGGAAGGTGTGGCGGTGGTGTTCGGCTCTGCCTTCGGCCTCGGCCCCAACT TCCGCATCTCCTATGCCACGTCGGATGCACTGCTGGAGGAAGCCTGCACGCGCATCCAGCGCTTCACGGCATCGCTGACC TGA
Upstream 100 bases:
>100_bases GATCAGCCGACAATGCTTGCACTGAGCGAAATCATGCGACATGAGAAGCGCCGCGGCCGCTCCTGGCCGCGCCGATCTTC TCAAGGAGAGATATTTGGTC
Downstream 100 bases:
>100_bases CCGGATCGATCTGACGACAACAGAAACCCGGCGCAGTCATCGCCGGGTTTTTTGTTGGAGGCGGGGCACCTTACGCCTGC TGCCTTGCTTGCCTGGCCGA
Product: aspartate aminotransferase
Products: NA
Alternate protein names: AspAT; Transaminase A [H]
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MAFLADTLSRVKPSATIAVTQKARELKNAGRDIIGLGAGEPDFDTPDNIKNAAIEAIRRGETKYPPVSGIVPLREAIAKK FKRENNLDYKPEQTIVGTGGKQILFNAFMATLNPGDEVIIPRPYWVSYPEMVAICGGTSVFADTSIENGFKLTAEVLEKA ITPKTKWLLMNSPSNPSGAAYTQAELRALADVLLKHPHVWTLTDDMYEHLTYGDFAFKTIAEVEPKLYERTLTMNGVSKA YAMTGWRIGYAAGPVQLIKAMDMIQGQQTSGACTIAQWASVEALNGPQDFIARNKAIFQGRRDLVVSMLNQARGITCPSP EGAFYVYPSCAQLIGKKTKAGKVIDTDEAFCSELLEAEGVAVVFGSAFGLGPNFRISYATSDALLEEACTRIQRFTASLT
Sequences:
>Translated_400_residues MAFLADTLSRVKPSATIAVTQKARELKNAGRDIIGLGAGEPDFDTPDNIKNAAIEAIRRGETKYPPVSGIVPLREAIAKK FKRENNLDYKPEQTIVGTGGKQILFNAFMATLNPGDEVIIPRPYWVSYPEMVAICGGTSVFADTSIENGFKLTAEVLEKA ITPKTKWLLMNSPSNPSGAAYTQAELRALADVLLKHPHVWTLTDDMYEHLTYGDFAFKTIAEVEPKLYERTLTMNGVSKA YAMTGWRIGYAAGPVQLIKAMDMIQGQQTSGACTIAQWASVEALNGPQDFIARNKAIFQGRRDLVVSMLNQARGITCPSP EGAFYVYPSCAQLIGKKTKAGKVIDTDEAFCSELLEAEGVAVVFGSAFGLGPNFRISYATSDALLEEACTRIQRFTASLT >Mature_399_residues AFLADTLSRVKPSATIAVTQKARELKNAGRDIIGLGAGEPDFDTPDNIKNAAIEAIRRGETKYPPVSGIVPLREAIAKKF KRENNLDYKPEQTIVGTGGKQILFNAFMATLNPGDEVIIPRPYWVSYPEMVAICGGTSVFADTSIENGFKLTAEVLEKAI TPKTKWLLMNSPSNPSGAAYTQAELRALADVLLKHPHVWTLTDDMYEHLTYGDFAFKTIAEVEPKLYERTLTMNGVSKAY AMTGWRIGYAAGPVQLIKAMDMIQGQQTSGACTIAQWASVEALNGPQDFIARNKAIFQGRRDLVVSMLNQARGITCPSPE GAFYVYPSCAQLIGKKTKAGKVIDTDEAFCSELLEAEGVAVVFGSAFGLGPNFRISYATSDALLEEACTRIQRFTASLT
Specific function: Required for symbiotic nitrogen fixation [H]
COG id: COG0436
COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI95147551, Length=402, Percent_Identity=26.1194029850746, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI169881279, Length=402, Percent_Identity=26.1194029850746, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI56713254, Length=320, Percent_Identity=27.1875, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI56713256, Length=320, Percent_Identity=27.1875, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI4507369, Length=398, Percent_Identity=24.6231155778894, Blast_Score=109, Evalue=4e-24, Organism=Homo sapiens, GI169881281, Length=395, Percent_Identity=23.2911392405063, Blast_Score=104, Evalue=1e-22, Organism=Escherichia coli, GI1786816, Length=371, Percent_Identity=26.9541778975741, Blast_Score=148, Evalue=5e-37, Organism=Escherichia coli, GI1788627, Length=396, Percent_Identity=26.7676767676768, Blast_Score=135, Evalue=5e-33, Organism=Escherichia coli, GI1788722, Length=356, Percent_Identity=30.8988764044944, Blast_Score=121, Evalue=9e-29, Organism=Caenorhabditis elegans, GI71994476, Length=363, Percent_Identity=27.2727272727273, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71994472, Length=363, Percent_Identity=27.2727272727273, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17567663, Length=384, Percent_Identity=23.6979166666667, Blast_Score=114, Evalue=9e-26, Organism=Caenorhabditis elegans, GI17567369, Length=256, Percent_Identity=27.734375, Blast_Score=102, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6322401, Length=397, Percent_Identity=26.9521410579345, Blast_Score=130, Evalue=5e-31, Organism=Saccharomyces cerevisiae, GI6320317, Length=249, Percent_Identity=24.8995983935743, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI28573069, Length=361, Percent_Identity=24.9307479224377, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI24646114, Length=361, Percent_Identity=24.9307479224377, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI28573067, Length=361, Percent_Identity=24.9307479224377, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI28573065, Length=361, Percent_Identity=24.9307479224377, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI18859735, Length=380, Percent_Identity=23.9473684210526, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24641770, Length=375, Percent_Identity=26.4, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24641760, Length=375, Percent_Identity=26.4, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24641768, Length=375, Percent_Identity=26.4, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24641766, Length=375, Percent_Identity=26.4, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24641764, Length=375, Percent_Identity=26.4, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI45551451, Length=375, Percent_Identity=26.4, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001176 - InterPro: IPR004839 - InterPro: IPR004838 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.1 [H]
Molecular weight: Translated: 43542; Mature: 43411
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFLADTLSRVKPSATIAVTQKARELKNAGRDIIGLGAGEPDFDTPDNIKNAAIEAIRRG CCHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCC ETKYPPVSGIVPLREAIAKKFKRENNLDYKPEQTIVGTGGKQILFNAFMATLNPGDEVII CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCEEE PRPYWVSYPEMVAICGGTSVFADTSIENGFKLTAEVLEKAITPKTKWLLMNSPSNPSGAA CCCCCCCCHHHEEEECCCCEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCH YTQAELRALADVLLKHPHVWTLTDDMYEHLTYGDFAFKTIAEVEPKLYERTLTMNGVSKA HHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCHHH YAMTGWRIGYAAGPVQLIKAMDMIQGQQTSGACTIAQWASVEALNGPQDFIARNKAIFQG HHHCCEEEECCCCHHHHHHHHHHHCCCCCCCCEEEHHHCCCCCCCCCHHHHHHHHHHHHC RRDLVVSMLNQARGITCPSPEGAFYVYPSCAQLIGKKTKAGKVIDTDEAFCSELLEAEGV HHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHCCCCCCCCEEECHHHHHHHHHHCCCE AVVFGSAFGLGPNFRISYATSDALLEEACTRIQRFTASLT EEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AFLADTLSRVKPSATIAVTQKARELKNAGRDIIGLGAGEPDFDTPDNIKNAAIEAIRRG CHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCC ETKYPPVSGIVPLREAIAKKFKRENNLDYKPEQTIVGTGGKQILFNAFMATLNPGDEVII CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCEEE PRPYWVSYPEMVAICGGTSVFADTSIENGFKLTAEVLEKAITPKTKWLLMNSPSNPSGAA CCCCCCCCHHHEEEECCCCEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCH YTQAELRALADVLLKHPHVWTLTDDMYEHLTYGDFAFKTIAEVEPKLYERTLTMNGVSKA HHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCHHH YAMTGWRIGYAAGPVQLIKAMDMIQGQQTSGACTIAQWASVEALNGPQDFIARNKAIFQG HHHCCEEEECCCCHHHHHHHHHHHCCCCCCCCEEEHHHCCCCCCCCCHHHHHHHHHHHHC RRDLVVSMLNQARGITCPSPEGAFYVYPSCAQLIGKKTKAGKVIDTDEAFCSELLEAEGV HHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHCCCCCCCCEEECHHHHHHHHHHCCCE AVVFGSAFGLGPNFRISYATSDALLEEACTRIQRFTASLT EEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2019560; 8096210; 11481430 [H]