Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
---|---|
Accession | NC_002678 |
Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13472288
Identifier: 13472288
GI number: 13472288
Start: 2052869
End: 2053177
Strand: Direct
Name: 13472288
Synonym: mlr2530
Alternate gene names: NA
Gene position: 2052869-2053177 (Clockwise)
Preceding gene: 13472286
Following gene: 13472290
Centisome position: 29.18
GC content: 56.63
Gene sequence:
>309_bases ATGACTAAGCTCGAACAGATCGAAAGATCCATAGCAGCCTTGAGCCCCAAAGAGCTGAATGCCTTTGCCAAATGGTTCGA GGCGTTCCAGGCAGATGTATGGGACAAGCAGATCGAGGCCGATGCAAAGGCAGGTCGACTGGACGGGTTTGCCAAAAAGG CGTTGGCCGAAATTCGAGCCATCATGGGCAGTGGCAAGCGCTTCTATCATGCGGCCCCAAACACCGGCCCGCCGCCACCT AACGAAGCGGTTGTAGCAAGTGGTGTATGGGCCAAACGCCGTTGGCAGATCACGCCAGGGTGCTCCTGA
Upstream 100 bases:
>100_bases CAGGCTACCAAGCATGGGAAGGCGGGATTTGTCCCGCCTTTTTGTTTGTCTGGGGTTAGCTATTTAACTTTGCAACCTCG ATGATGTTACTATCCAATTC
Downstream 100 bases:
>100_bases TCGGAGGACCCAGAAGATGCCATTCAGGACCCGTCTGTCGTTCACCCGAGGAACGCCACGCGGCTTGTTCGGCAGCATCG GCTTGATGGCGGTCCATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MTKLEQIERSIAALSPKELNAFAKWFEAFQADVWDKQIEADAKAGRLDGFAKKALAEIRAIMGSGKRFYHAAPNTGPPPP NEAVVASGVWAKRRWQITPGCS
Sequences:
>Translated_102_residues MTKLEQIERSIAALSPKELNAFAKWFEAFQADVWDKQIEADAKAGRLDGFAKKALAEIRAIMGSGKRFYHAAPNTGPPPP NEAVVASGVWAKRRWQITPGCS >Mature_101_residues TKLEQIERSIAALSPKELNAFAKWFEAFQADVWDKQIEADAKAGRLDGFAKKALAEIRAIMGSGKRFYHAAPNTGPPPPN EAVVASGVWAKRRWQITPGCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11213; Mature: 11082
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLEQIERSIAALSPKELNAFAKWFEAFQADVWDKQIEADAKAGRLDGFAKKALAEIRA CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH IMGSGKRFYHAAPNTGPPPPNEAVVASGVWAKRRWQITPGCS HHCCCCEEEEECCCCCCCCCCCCEEECCCCCCCEECCCCCCC >Mature Secondary Structure TKLEQIERSIAALSPKELNAFAKWFEAFQADVWDKQIEADAKAGRLDGFAKKALAEIRA CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH IMGSGKRFYHAAPNTGPPPPNEAVVASGVWAKRRWQITPGCS HHCCCCEEEEECCCCCCCCCCCCEEECCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA