Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
---|---|
Accession | NC_002678 |
Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is yfiK [C]
Identifier: 13472268
GI number: 13472268
Start: 2034113
End: 2034712
Strand: Direct
Name: yfiK [C]
Synonym: mlr2506
Alternate gene names: 13472268
Gene position: 2034113-2034712 (Clockwise)
Preceding gene: 13472266
Following gene: 13472270
Centisome position: 28.91
GC content: 68.17
Gene sequence:
>600_bases ATGCTCCAGCCTATCCTGCCGCTCATCCTGTTTGCCTTCGTGGCCACCGCCACGCCCGGCATCGCGACGACCTTGTCGAC CGCCTCGGGCGCGCAGTTCGGCTTTCGCCGTTCGGTCCCGCTGATGATCGGCAGCGCCGCCGGCCTCGCCACGGTGACGG GGGCTGCCGCCGCCGGGCTCGCGGGCCTGCTGTTTGCGGTGCCTTCGCTGCAAATGGCGATAAAGGTGATCGGCTCGCTC TATCTCCTGTGGCTGGCGCTCAAGATCGGCCGCGCCGGACCGCCCAATCTCGATGTGACCATGGCGAAACCGAACAGCTT CCTTGGCGGCGCCGGCATCCAGTGGATGAATCCCAAGGGCTGGGCGATGGGGCTTGGTGCGGCGGCCTCGTTCGCCGCAC TGGCCGATGGACCAGGACACCTCGCTCTGCTGCTCGGCTCGACCTTCGGCCTCGCCGCCGCCGTTTCGCTGTCCGTCTGG TGCATGGCCGGCATGGTGCTGGCCCGGCTGCTCAAGACCGAATGGCAATGGCGCGCGCTCAACATCGTGCTGGCGCTGGT GCTGGCCGCGTCGATCATCCCGATGTGGCGGTCGGCTTAG
Upstream 100 bases:
>100_bases ATCATGTCGCCATTATAGATGCTAATGCCAAGCATCGCAAACATTGCATTTACTGATGCCAGGTCAAGCCTACTATGGAG CCTTCGACGTAGGACGCCCG
Downstream 100 bases:
>100_bases GACACTCAAGCTAAGTCTGCGCCAGCACCCCCACCCGGACCTTCGGTCCGACCTCCCCACGAGGGGGAGGTCGGGAGCGC ACCTTTTGCGGCGTTTCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Lysine Exporter Protein; Amino Acid Transporter LysE; Transporter LysE Family; Amino Acid Efflux Protein; Transporter Protein; RhtB Family Transporter; Transporter LysE Family Protein; Threonine Efflux Protein-Like Protein; Threonine Efflux Protein-Like; Translocator Protein LysE Family; Transmembrane Transporter Protein; ABC Transporter; LysE/RhtB Family Efflux Protein; LysE-Type Translocator; LysE Type Translocator Family; LysE Family Protein; LOW QUALITY PROTEIN Lysine Exporter Protein LysE; Amino Acid Efflux Protein LysE Family; RhtB Family Protein; Neutral Amino-Acid Efflux System; Transporter-LysE Family; Transmembrane Transporter Protein LysE Type Translocator; Threonine Efflux Protein
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MLQPILPLILFAFVATATPGIATTLSTASGAQFGFRRSVPLMIGSAAGLATVTGAAAAGLAGLLFAVPSLQMAIKVIGSL YLLWLALKIGRAGPPNLDVTMAKPNSFLGGAGIQWMNPKGWAMGLGAAASFAALADGPGHLALLLGSTFGLAAAVSLSVW CMAGMVLARLLKTEWQWRALNIVLALVLAASIIPMWRSA
Sequences:
>Translated_199_residues MLQPILPLILFAFVATATPGIATTLSTASGAQFGFRRSVPLMIGSAAGLATVTGAAAAGLAGLLFAVPSLQMAIKVIGSL YLLWLALKIGRAGPPNLDVTMAKPNSFLGGAGIQWMNPKGWAMGLGAAASFAALADGPGHLALLLGSTFGLAAAVSLSVW CMAGMVLARLLKTEWQWRALNIVLALVLAASIIPMWRSA >Mature_199_residues MLQPILPLILFAFVATATPGIATTLSTASGAQFGFRRSVPLMIGSAAGLATVTGAAAAGLAGLLFAVPSLQMAIKVIGSL YLLWLALKIGRAGPPNLDVTMAKPNSFLGGAGIQWMNPKGWAMGLGAAASFAALADGPGHLALLLGSTFGLAAAVSLSVW CMAGMVLARLLKTEWQWRALNIVLALVLAASIIPMWRSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20355; Mature: 20355
Theoretical pI: Translated: 11.62; Mature: 11.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQPILPLILFAFVATATPGIATTLSTASGAQFGFRRSVPLMIGSAAGLATVTGAAAAGL CCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH AGLLFAVPSLQMAIKVIGSLYLLWLALKIGRAGPPNLDVTMAKPNSFLGGAGIQWMNPKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEECCCC WAMGLGAAASFAALADGPGHLALLLGSTFGLAAAVSLSVWCMAGMVLARLLKTEWQWRAL CCHHCCHHHHHHHHCCCCCCEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH NIVLALVLAASIIPMWRSA HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLQPILPLILFAFVATATPGIATTLSTASGAQFGFRRSVPLMIGSAAGLATVTGAAAAGL CCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH AGLLFAVPSLQMAIKVIGSLYLLWLALKIGRAGPPNLDVTMAKPNSFLGGAGIQWMNPKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEECCCC WAMGLGAAASFAALADGPGHLALLLGSTFGLAAAVSLSVWCMAGMVLARLLKTEWQWRAL CCHHCCHHHHHHHHCCCCCCEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH NIVLALVLAASIIPMWRSA HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA