Click here to switch to the map view.

The map label for this gene is yyaP [H]

Identifier: 13472266

GI number: 13472266

Start: 2032412

End: 2033086

Strand: Direct

Name: yyaP [H]

Synonym: mlr2503

Alternate gene names: 13472266

Gene position: 2032412-2033086 (Clockwise)

Preceding gene: 13472265

Following gene: 13472268

Centisome position: 28.89

GC content: 60.89

Gene sequence:

>675_bases
GTGGATGGAACAAGGGAGAGACCCATGAGAAAGATCATCGCCGCCACCTTCGTCAGCCTCGACGGTGTCATGCAGGCCCC
CGGCGGACCGGAAGAGGATCCGGTCGGCGGCTTCAAGTTCGGCGGCTGGACCTTCCATTACTTTGACGAGGTGGGCGGCG
CGGCAATGGATGAACTCTTCTCCAAACCCTTCACCTTGCTGCTCGGCCGCAGAACCTACGACATCTTTACCGCCTACTGG
CCGTATCAGAAAGATCCGATCGCCGATGCCTTCAACCCCGCGACCAAATATGTGGCGACGCATCGGCCTGACACACTCAC
CTGGCAGAACACGCAATGGCTCGGGGAAGATATCGTTGCGGCGCTACGCCGCCTCAGCAAGCAGGATGGACCCGACCTGC
TCATCCAGCGATCGGCCGACCTGATCCAGACCTTGCTCGCCAACGGGCTGATCGACGAAATCCGGCTGATGATCTTCCCG
CTGTTGCTGGGCAAGGGCAAGCGTCTGTTCGGCGATGGCGCAATGCCGGCCGCGTTCAAGCTTGTGAAGTCGCAGACGTC
CAGCACCGGCGTCATCATCGCGACTTACGAACGATCAGGCGAAATCGAGGTCGGCTCCTTTGTCATGGGCGAACCGTCCG
TCGCCGAGCTGGAGCGGCGCAGGAACTGGAAGTAG

Upstream 100 bases:

>100_bases
CAGCTGAGGCATCGATGCGCGGATTTGGCCAAAATTTCTCAGGCCCTGTCGGGGCGGGTGCGGGCCAGCCGTCCTTGGGC
CACAATCCGCCCGCGACGGC

Downstream 100 bases:

>100_bases
CGGACGGCCTTGGTTACCTTTCCTCTCCCTCCGGAGGGAGGAACCCAAGTTCCGCTTGGTCTCAAGCCGCCGCCGGTCGC
CGCGCCAGCCCATCCCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MDGTRERPMRKIIAATFVSLDGVMQAPGGPEEDPVGGFKFGGWTFHYFDEVGGAAMDELFSKPFTLLLGRRTYDIFTAYW
PYQKDPIADAFNPATKYVATHRPDTLTWQNTQWLGEDIVAALRRLSKQDGPDLLIQRSADLIQTLLANGLIDEIRLMIFP
LLLGKGKRLFGDGAMPAAFKLVKSQTSSTGVIIATYERSGEIEVGSFVMGEPSVAELERRRNWK

Sequences:

>Translated_224_residues
MDGTRERPMRKIIAATFVSLDGVMQAPGGPEEDPVGGFKFGGWTFHYFDEVGGAAMDELFSKPFTLLLGRRTYDIFTAYW
PYQKDPIADAFNPATKYVATHRPDTLTWQNTQWLGEDIVAALRRLSKQDGPDLLIQRSADLIQTLLANGLIDEIRLMIFP
LLLGKGKRLFGDGAMPAAFKLVKSQTSSTGVIIATYERSGEIEVGSFVMGEPSVAELERRRNWK
>Mature_224_residues
MDGTRERPMRKIIAATFVSLDGVMQAPGGPEEDPVGGFKFGGWTFHYFDEVGGAAMDELFSKPFTLLLGRRTYDIFTAYW
PYQKDPIADAFNPATKYVATHRPDTLTWQNTQWLGEDIVAALRRLSKQDGPDLLIQRSADLIQTLLANGLIDEIRLMIFP
LLLGKGKRLFGDGAMPAAFKLVKSQTSSTGVIIATYERSGEIEVGSFVMGEPSVAELERRRNWK

Specific function: Unknown

COG id: COG0262

COG function: function code H; Dihydrofolate reductase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ywjB [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002734 [H]

Pfam domain/function: PF01872 RibD_C [H]

EC number: NA

Molecular weight: Translated: 24980; Mature: 24980

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGTRERPMRKIIAATFVSLDGVMQAPGGPEEDPVGGFKFGGWTFHYFDEVGGAAMDELF
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCEEEEHHHHHCCHHHHHHH
SKPFTLLLGRRTYDIFTAYWPYQKDPIADAFNPATKYVATHRPDTLTWQNTQWLGEDIVA
CCCHHHHHCCCHHEEEEEECCCCCCCCCHHCCHHHHHHHCCCCCCEEECCCHHHHHHHHH
ALRRLSKQDGPDLLIQRSADLIQTLLANGLIDEIRLMIFPLLLGKGKRLFGDGAMPAAFK
HHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCHHHHH
LVKSQTSSTGVIIATYERSGEIEVGSFVMGEPSVAELERRRNWK
HHHHCCCCCCEEEEEECCCCCEEECCEEECCCCHHHHHHHCCCC
>Mature Secondary Structure
MDGTRERPMRKIIAATFVSLDGVMQAPGGPEEDPVGGFKFGGWTFHYFDEVGGAAMDELF
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCEEEEHHHHHCCHHHHHHH
SKPFTLLLGRRTYDIFTAYWPYQKDPIADAFNPATKYVATHRPDTLTWQNTQWLGEDIVA
CCCHHHHHCCCHHEEEEEECCCCCCCCCHHCCHHHHHHHCCCCCCEEECCCHHHHHHHHH
ALRRLSKQDGPDLLIQRSADLIQTLLANGLIDEIRLMIFPLLLGKGKRLFGDGAMPAAFK
HHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCHHHHH
LVKSQTSSTGVIIATYERSGEIEVGSFVMGEPSVAELERRRNWK
HHHHCCCCCCEEEEEECCCCCEEECCEEECCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]