Click here to switch to the map view.

The map label for this gene is ygaV [C]

Identifier: 13472009

GI number: 13472009

Start: 1759180

End: 1759500

Strand: Reverse

Name: ygaV [C]

Synonym: mll2166

Alternate gene names: 13472009

Gene position: 1759500-1759180 (Counterclockwise)

Preceding gene: 13472010

Following gene: 13472008

Centisome position: 25.01

GC content: 65.42

Gene sequence:

>321_bases
ATGAAACTCGAACAAGCGGCGAAGCAATTGGAGGCGCTCGGCAATCCGACGCGCTTGAACCTTTATCGTATCCTGGTTCG
GGCCGGCGAGGCTGGCCGGCCGGTCGGCTTCCTGCAAGAGAGCCTCGGCATCGCCGCCTCGACGCTGTCGCACCATCTGC
ACCGGCTGATCCTGACCGGGCTGGTCAGCCAGGAGCGGCAGGCGACGACGCTGATCTGCCGCGCCAACTATCCGATGATG
AACGATCTGATCGGCTTCCTGGCCGACGAATGCTGCGCCGATGCCGCCTGCAATCCGGCAGCGGGTGACGCGGCCGCCTG
A

Upstream 100 bases:

>100_bases
GTCGTCGTCGACGCAAGCGGCAAGCGGGTCGTCTGAGGCTATTTCGAAAAATATCGAAATAGGACTTGACGGCTCCTGTC
GCTGGCCGCATGCTATTTCC

Downstream 100 bases:

>100_bases
ATTTTTCTCTGCTATTTCGATAATACCGGGAGGATGGAAAATATGGTCCTGCAAGACGATCTGCCCATCGCCGTCATCGG
CGCCGGCCCGGTTGGCCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator; Transcriptional Regulator ArsR Family Protein; Transcriptional Regulator ArsR

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MKLEQAAKQLEALGNPTRLNLYRILVRAGEAGRPVGFLQESLGIAASTLSHHLHRLILTGLVSQERQATTLICRANYPMM
NDLIGFLADECCADAACNPAAGDAAA

Sequences:

>Translated_106_residues
MKLEQAAKQLEALGNPTRLNLYRILVRAGEAGRPVGFLQESLGIAASTLSHHLHRLILTGLVSQERQATTLICRANYPMM
NDLIGFLADECCADAACNPAAGDAAA
>Mature_106_residues
MKLEQAAKQLEALGNPTRLNLYRILVRAGEAGRPVGFLQESLGIAASTLSHHLHRLILTGLVSQERQATTLICRANYPMM
NDLIGFLADECCADAACNPAAGDAAA

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11304; Mature: 11304

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLEQAAKQLEALGNPTRLNLYRILVRAGEAGRPVGFLQESLGIAASTLSHHLHRLILTG
CCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LVSQERQATTLICRANYPMMNDLIGFLADECCADAACNPAAGDAAA
HHHCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKLEQAAKQLEALGNPTRLNLYRILVRAGEAGRPVGFLQESLGIAASTLSHHLHRLILTG
CCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LVSQERQATTLICRANYPMMNDLIGFLADECCADAACNPAAGDAAA
HHHCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA