Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471948
Identifier: 13471948
GI number: 13471948
Start: 1702147
End: 1703382
Strand: Reverse
Name: 13471948
Synonym: mll2082
Alternate gene names: NA
Gene position: 1703382-1702147 (Counterclockwise)
Preceding gene: 13471949
Following gene: 13471947
Centisome position: 24.21
GC content: 63.19
Gene sequence:
>1236_bases ATGGATGTGGCTGGCCAGGCGGTGCAAATTGCTACGGTGGATGACGGCTTGCCCGTTGGGGAAACCTCCCGTCCGGTGAT CGTCCGGGCGAACGATGCATATACGGCGCGATTGCACACAAGCCTTGAAGCGGTCAGGCCGCTCTGGCTGCGCTTCCAAA GGGACGGTGTCTGCACCGCCCACCAGCATTTTGCGTGGGTGGAGGGAATCGTGGCGCGGCTGATGCCGGCAGGCGCGGAG CCGCTCATCGTTGAGGTGAACGACGCGGTGACGGGCGCGCCCTTGATGCTGGTGCCGCTGATGCTGCGATCAGCCTTCCA GCATCGGGTGATCGAGTGGCTGAGCTGTGGCGTGTGCGACTATTCGGCACCGTTGCTGGCCGATGCGGGTACGTGGACCG CCCAATCGGCGCAGGCTGCGTGGGCCGCGGTGCGTTCCGTGCTGCCGTCGGCGGATCGCTTCCATATCACGGGAATACCG CAGCAGATCGGCGGCGTCGCCAATCCCCTGGCGTTGCTGACGACCGCGCGCGATTCCGTCCAGACCACCTTCGGTCTTGC CATCGACGGCGACCCGGAAACCGTGCTCAAGCGTCTCTGCAGGCCATCTTTCGTCAAGGAATTCGGCAAGGACTGGCGCC GGCTCGAAAGGCTCGGCGATGTGGAACTCGTCCAGGCCGTTTCGGCGGACCAGGTGGAGGAAATCTTCGGCGAACTGGTC CGGATGCGGCTCAGCCGGTTCCGCGAGCTTGGCCGCTTCGACCTGCTGACGCAGGAGGCGGTTGTCGATTTCTACCGTGA CGCGGCCATTCAGGGCTTGTCGGACGGTTCGGTGCGGCTCTTCGGGCTGCGCGTCGGCGGCTCCCTGATCGCGGTTCAAT ATCTGCTGGTCCATCAAGGGACTGTTCATGCTCTGCTGATAGCAATGGACCAGAGCGCCGTGCCCAATGTCTCACCTGGA ATGGCGATCATTGGCAGGTTGATGAGGTGGGCACGCGAGCAAGACTTCGGCTATTTCGACCTGTCGGTCGGCAACCAGAG CTACAAGGAACATATGGGCGCCAAGGGTTCGGTTCTTGTGGAACTCTGCCATGGATACACGATGCGGGGCAGGGCGGCGA GCAACGCCATCGATCTACGCAACCGGACCGAGGCCTTCGTGCGATCCAAACCAGGGCTGCTCAATGTGGCCCAGAGACTG ATGCGAGGTTTGCGGCGTTCGCGTGGAGGACGTTGA
Upstream 100 bases:
>100_bases TCACCGCATGTGGAACATCGAGCATCCGGACCAGCAGCGTAACAGCCGCTTGGGCTCCTGGCGGCGGGCGGTCACGTTCG CCGCGGTAAAGCGATAGGAG
Downstream 100 bases:
>100_bases GTGCAGGCCTGAACGACGGAGAAGTACGTGACAGGCCAGGCAGTGCGAATAGTCGCGGTGGGGGATGCACCGGGCCAACC CCTTTCCCCAATTATCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MDVAGQAVQIATVDDGLPVGETSRPVIVRANDAYTARLHTSLEAVRPLWLRFQRDGVCTAHQHFAWVEGIVARLMPAGAE PLIVEVNDAVTGAPLMLVPLMLRSAFQHRVIEWLSCGVCDYSAPLLADAGTWTAQSAQAAWAAVRSVLPSADRFHITGIP QQIGGVANPLALLTTARDSVQTTFGLAIDGDPETVLKRLCRPSFVKEFGKDWRRLERLGDVELVQAVSADQVEEIFGELV RMRLSRFRELGRFDLLTQEAVVDFYRDAAIQGLSDGSVRLFGLRVGGSLIAVQYLLVHQGTVHALLIAMDQSAVPNVSPG MAIIGRLMRWAREQDFGYFDLSVGNQSYKEHMGAKGSVLVELCHGYTMRGRAASNAIDLRNRTEAFVRSKPGLLNVAQRL MRGLRRSRGGR
Sequences:
>Translated_411_residues MDVAGQAVQIATVDDGLPVGETSRPVIVRANDAYTARLHTSLEAVRPLWLRFQRDGVCTAHQHFAWVEGIVARLMPAGAE PLIVEVNDAVTGAPLMLVPLMLRSAFQHRVIEWLSCGVCDYSAPLLADAGTWTAQSAQAAWAAVRSVLPSADRFHITGIP QQIGGVANPLALLTTARDSVQTTFGLAIDGDPETVLKRLCRPSFVKEFGKDWRRLERLGDVELVQAVSADQVEEIFGELV RMRLSRFRELGRFDLLTQEAVVDFYRDAAIQGLSDGSVRLFGLRVGGSLIAVQYLLVHQGTVHALLIAMDQSAVPNVSPG MAIIGRLMRWAREQDFGYFDLSVGNQSYKEHMGAKGSVLVELCHGYTMRGRAASNAIDLRNRTEAFVRSKPGLLNVAQRL MRGLRRSRGGR >Mature_411_residues MDVAGQAVQIATVDDGLPVGETSRPVIVRANDAYTARLHTSLEAVRPLWLRFQRDGVCTAHQHFAWVEGIVARLMPAGAE PLIVEVNDAVTGAPLMLVPLMLRSAFQHRVIEWLSCGVCDYSAPLLADAGTWTAQSAQAAWAAVRSVLPSADRFHITGIP QQIGGVANPLALLTTARDSVQTTFGLAIDGDPETVLKRLCRPSFVKEFGKDWRRLERLGDVELVQAVSADQVEEIFGELV RMRLSRFRELGRFDLLTQEAVVDFYRDAAIQGLSDGSVRLFGLRVGGSLIAVQYLLVHQGTVHALLIAMDQSAVPNVSPG MAIIGRLMRWAREQDFGYFDLSVGNQSYKEHMGAKGSVLVELCHGYTMRGRAASNAIDLRNRTEAFVRSKPGLLNVAQRL MRGLRRSRGGR
Specific function: Unknown
COG id: COG5653
COG function: function code M; Protein involved in cellulose biosynthesis (CelD)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45082; Mature: 45082
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVAGQAVQIATVDDGLPVGETSRPVIVRANDAYTARLHTSLEAVRPLWLRFQRDGVCTA CCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHEECCCCCHH HQHFAWVEGIVARLMPAGAEPLIVEVNDAVTGAPLMLVPLMLRSAFQHRVIEWLSCGVCD HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC YSAPLLADAGTWTAQSAQAAWAAVRSVLPSADRFHITGIPQQIGGVANPLALLTTARDSV CCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHCCCCCCHHHHHHHHHHH QTTFGLAIDGDPETVLKRLCRPSFVKEFGKDWRRLERLGDVELVQAVSADQVEEIFGELV HHHEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHH RMRLSRFRELGRFDLLTQEAVVDFYRDAAIQGLSDGSVRLFGLRVGGSLIAVQYLLVHQG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHCCC TVHALLIAMDQSAVPNVSPGMAIIGRLMRWAREQDFGYFDLSVGNQSYKEHMGAKGSVLV HHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCHHHH ELCHGYTMRGRAASNAIDLRNRTEAFVRSKPGLLNVAQRLMRGLRRSRGGR HHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDVAGQAVQIATVDDGLPVGETSRPVIVRANDAYTARLHTSLEAVRPLWLRFQRDGVCTA CCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHEECCCCCHH HQHFAWVEGIVARLMPAGAEPLIVEVNDAVTGAPLMLVPLMLRSAFQHRVIEWLSCGVCD HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC YSAPLLADAGTWTAQSAQAAWAAVRSVLPSADRFHITGIPQQIGGVANPLALLTTARDSV CCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHCCCCCCHHHHHHHHHHH QTTFGLAIDGDPETVLKRLCRPSFVKEFGKDWRRLERLGDVELVQAVSADQVEEIFGELV HHHEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHH RMRLSRFRELGRFDLLTQEAVVDFYRDAAIQGLSDGSVRLFGLRVGGSLIAVQYLLVHQG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHCCC TVHALLIAMDQSAVPNVSPGMAIIGRLMRWAREQDFGYFDLSVGNQSYKEHMGAKGSVLV HHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCHHHH ELCHGYTMRGRAASNAIDLRNRTEAFVRSKPGLLNVAQRLMRGLRRSRGGR HHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA