Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
---|---|
Accession | NC_002678 |
Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13471949
Identifier: 13471949
GI number: 13471949
Start: 1703386
End: 1704687
Strand: Reverse
Name: 13471949
Synonym: mll2083
Alternate gene names: NA
Gene position: 1704687-1703386 (Counterclockwise)
Preceding gene: 13471950
Following gene: 13471948
Centisome position: 24.23
GC content: 65.51
Gene sequence:
>1302_bases GTGAAGTTCCCCCTCCATCTGGTGCGGCGCCTCGTGCTGATGATCGGCGGCGAGGCGATGCAGAGCGGCTTTCACTTTGC CCTCAACATCGCGCTGCTGCACATGCTGTCGGCGCAAGGCTACGGCCTTTTCGCCATAGCCATGGTGATGGGCGGCGTCG GACTGTCCTACATCAGGTCGCTCACCGCGGTTCCGGCCTCGATATGGATGGGCAAGAGCACCAACAGTGCCGGCGTCGAC GCCCATGACGTGGCCTTTGGATCCGCGGCGCTGGTGGTGGCGCTGCTGATGGCCGTCGGCACGGCTGTTCTGATGCGCCT CCTGGGCGACCCGAGCGGCATTGCGGCCGGCTGCTTCGTCGGCGCATGGTCGCTGCGCAGCCATATGCGCACGGCATTCT TCGCCCGCCGCCAGCAGGTGATCGTCTCCGTCAGCGACGCGGCTTTCACAATCGCCGGCACCGTGTTCGCCGGCCTAGCG ATCTGGTACGCCGACGCCGCGCTGCAGACCGTCTTCTATGCCCTTGCCGCAGCCAATGTGATCGGCATCTTCGTCCTGGC CCGGCTGGCGCGCCGCACGCTTCGCATCAGCTTCCGCATGCCGACGCGGCGGCGCTATACCAGACTCTGGCGCCAGCTGT GCTGGTCGGCGTTCAGCGCGACCACCACCAACATCCAGGGCCAGTGCCTGGCGCTGCTGGTCGCCGGCATTGCCGGACCC GCGGCTTACGCGCCGTTGGCGGCGGTGATCGTGCTGTTCGCGCCGCTGCGCATCATCAGTCTTGCCTTCGTGAACATGAC GCAGCCGGAGCTTGCCAAGCTGATGCGGCACAATGAAACGCGCCGCGTCTGGTCGCAGGCGAAGATCTGGTCGGTCGTCA TGGGGCTCGGCGGCCTGGCCTATGGATGCGCCATCCTGTTCGTCCTGCCGATGATCAAATCCCAGGCCCTGCAGGATGCC TCGGTCGGGTTCATCGGGCTTCTGGTGACAGTGAATTTCATCCCGATCATGCTCTACATCATGCCCCGCATCGTCCTGGA GATCTTCGGTGATTTCCGCATCGTCGCCTTCATCACCATGGGCGGCGCCATCGTCGGGCTGGCGCTGATCGCCGTTCTGC TGGCCGTGGCGTCCCCACCATGGGCGCTGCTGGGCTCCGCGGTCTCCGAGACCTTCGTGCTCGCGGCATCATGGTATTTC GCGCATCACCGCATGTGGAACATCGAGCATCCGGACCAGCAGCGTAACAGCCGCTTGGGCTCCTGGCGGCGGGCGGTCAC GTTCGCCGCGGTAAAGCGATAG
Upstream 100 bases:
>100_bases TCGCCGCGGCCGCGATCGCGGCGATCGCCGCCGACAAGCTAAAGGCTGCCATCGCCAGGCCGGGCCGGACGGCAAGCACC CGGCAGGCGGAGACGCGGCC
Downstream 100 bases:
>100_bases GAGATGGATGTGGCTGGCCAGGCGGTGCAAATTGCTACGGTGGATGACGGCTTGCCCGTTGGGGAAACCTCCCGTCCGGT GATCGTCCGGGCGAACGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MKFPLHLVRRLVLMIGGEAMQSGFHFALNIALLHMLSAQGYGLFAIAMVMGGVGLSYIRSLTAVPASIWMGKSTNSAGVD AHDVAFGSAALVVALLMAVGTAVLMRLLGDPSGIAAGCFVGAWSLRSHMRTAFFARRQQVIVSVSDAAFTIAGTVFAGLA IWYADAALQTVFYALAAANVIGIFVLARLARRTLRISFRMPTRRRYTRLWRQLCWSAFSATTTNIQGQCLALLVAGIAGP AAYAPLAAVIVLFAPLRIISLAFVNMTQPELAKLMRHNETRRVWSQAKIWSVVMGLGGLAYGCAILFVLPMIKSQALQDA SVGFIGLLVTVNFIPIMLYIMPRIVLEIFGDFRIVAFITMGGAIVGLALIAVLLAVASPPWALLGSAVSETFVLAASWYF AHHRMWNIEHPDQQRNSRLGSWRRAVTFAAVKR
Sequences:
>Translated_433_residues MKFPLHLVRRLVLMIGGEAMQSGFHFALNIALLHMLSAQGYGLFAIAMVMGGVGLSYIRSLTAVPASIWMGKSTNSAGVD AHDVAFGSAALVVALLMAVGTAVLMRLLGDPSGIAAGCFVGAWSLRSHMRTAFFARRQQVIVSVSDAAFTIAGTVFAGLA IWYADAALQTVFYALAAANVIGIFVLARLARRTLRISFRMPTRRRYTRLWRQLCWSAFSATTTNIQGQCLALLVAGIAGP AAYAPLAAVIVLFAPLRIISLAFVNMTQPELAKLMRHNETRRVWSQAKIWSVVMGLGGLAYGCAILFVLPMIKSQALQDA SVGFIGLLVTVNFIPIMLYIMPRIVLEIFGDFRIVAFITMGGAIVGLALIAVLLAVASPPWALLGSAVSETFVLAASWYF AHHRMWNIEHPDQQRNSRLGSWRRAVTFAAVKR >Mature_433_residues MKFPLHLVRRLVLMIGGEAMQSGFHFALNIALLHMLSAQGYGLFAIAMVMGGVGLSYIRSLTAVPASIWMGKSTNSAGVD AHDVAFGSAALVVALLMAVGTAVLMRLLGDPSGIAAGCFVGAWSLRSHMRTAFFARRQQVIVSVSDAAFTIAGTVFAGLA IWYADAALQTVFYALAAANVIGIFVLARLARRTLRISFRMPTRRRYTRLWRQLCWSAFSATTTNIQGQCLALLVAGIAGP AAYAPLAAVIVLFAPLRIISLAFVNMTQPELAKLMRHNETRRVWSQAKIWSVVMGLGGLAYGCAILFVLPMIKSQALQDA SVGFIGLLVTVNFIPIMLYIMPRIVLEIFGDFRIVAFITMGGAIVGLALIAVLLAVASPPWALLGSAVSETFVLAASWYF AHHRMWNIEHPDQQRNSRLGSWRRAVTFAAVKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46918; Mature: 46918
Theoretical pI: Translated: 11.57; Mature: 11.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFPLHLVRRLVLMIGGEAMQSGFHFALNIALLHMLSAQGYGLFAIAMVMGGVGLSYIRS CCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHH LTAVPASIWMGKSTNSAGVDAHDVAFGSAALVVALLMAVGTAVLMRLLGDPSGIAAGCFV HHHCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH GAWSLRSHMRTAFFARRQQVIVSVSDAAFTIAGTVFAGLAIWYADAALQTVFYALAAANV HHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGIFVLARLARRTLRISFRMPTRRRYTRLWRQLCWSAFSATTTNIQGQCLALLVAGIAGP HHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCH AAYAPLAAVIVLFAPLRIISLAFVNMTQPELAKLMRHNETRRVWSQAKIWSVVMGLGGLA HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH YGCAILFVLPMIKSQALQDASVGFIGLLVTVNFIPIMLYIMPRIVLEIFGDFRIVAFITM HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH GGAIVGLALIAVLLAVASPPWALLGSAVSETFVLAASWYFAHHRMWNIEHPDQQRNSRLG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCHHHHHHHH SWRRAVTFAAVKR HHHHHHHHHHHCC >Mature Secondary Structure MKFPLHLVRRLVLMIGGEAMQSGFHFALNIALLHMLSAQGYGLFAIAMVMGGVGLSYIRS CCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHH LTAVPASIWMGKSTNSAGVDAHDVAFGSAALVVALLMAVGTAVLMRLLGDPSGIAAGCFV HHHCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH GAWSLRSHMRTAFFARRQQVIVSVSDAAFTIAGTVFAGLAIWYADAALQTVFYALAAANV HHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGIFVLARLARRTLRISFRMPTRRRYTRLWRQLCWSAFSATTTNIQGQCLALLVAGIAGP HHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCH AAYAPLAAVIVLFAPLRIISLAFVNMTQPELAKLMRHNETRRVWSQAKIWSVVMGLGGLA HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH YGCAILFVLPMIKSQALQDASVGFIGLLVTVNFIPIMLYIMPRIVLEIFGDFRIVAFITM HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH GGAIVGLALIAVLLAVASPPWALLGSAVSETFVLAASWYFAHHRMWNIEHPDQQRNSRLG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCHHHHHHHH SWRRAVTFAAVKR HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA