Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471947
Identifier: 13471947
GI number: 13471947
Start: 1700896
End: 1702119
Strand: Reverse
Name: 13471947
Synonym: mll2080
Alternate gene names: NA
Gene position: 1702119-1700896 (Counterclockwise)
Preceding gene: 13471948
Following gene: 13471945
Centisome position: 24.19
GC content: 65.6
Gene sequence:
>1224_bases GTGACAGGCCAGGCAGTGCGAATAGTCGCGGTGGGGGATGCACCGGGCCAACCCCTTTCCCCAATTATCGCCGGTTGGGG CGCCGCCGCGCGCTTTGCCGCGCGGCTGCACACCAGTTTCGATTCCGTAAGGCCGCTGTGGCTGCGCCTCGAGGCGACCG GCGTGTGCACGGGCCATCAGGGCCTTGCCTGGGTGGAAGGGATCGCAAACCGGCTGATGCCCAAAAGCGCGGAACTGCTG GTCGTCGAGGTCAACGACGCCGCAACGGGCGCGCCGGTCATGCTGTTGCCGTTGATGCGCCGCCGGGCCATGGGCCATTA TGTGATCGAATGGCTGAGCTGCGGCGTGTGCGATTATTCCGCGCCGCTGCTGGCCGATGCGAGACCCTGGACCACGCAGA GCGCCGACGCCGCCTGGGCCGCGGTGCGCGCCGTGCTGCCGCCGACGGACCGCTTCCACATAGAGGGGATTCCGCGAGAG ATTCACGGCGTCGCCAATCCGCTGGCGCTGCTTTCGCAGGCGCGCGATTCCATCCAGATCGCTTCGAGCCTGGCCCTGCA TGGCGATCCCCAGACGCTGATCAAGCGCATCTGCAAATCGTCCTTCGCCAAGAATTTCCACAAGCACTGCCGCCGCTTCG AACAGATGGGCAAGCTCGATCTGGTCGAAGCCGAGACGCCCGACATGGTGGAGGCGCATTTCGCGACGCTGCTCGAGCTC AGGCTCAACCGCTTCCGCGAACTCGGGCGCTTTGACCTCCTGACCCAGGCGCCGGTCGTCGATTTCTACCGCAACGCCGC CTTGCAAGGCCTGTCCGACGGCTCGGTGCGGCTGTTTGGGCTGCGTGTCGGTGAAGCCTATCTCGCCGTCATGTACGTAC TTGTCATGAAGGGCACCTTGCACGCGCTTCTGCTCGGGATCGACCACGACGCGGTGGCCAACGCCTCGCCAGGCCTGACG ACGATCGGCAAGCTGATGATGTGGGGGGTGGCGCAGGGGCTCGACTGTTTCGACCTGTCGGTCGGCAGCCAGGGCTACAA GCAGCACATCGGCGCTTCGAGCGCGGTGCTGGCAGAATTGTGCGAGGCGGTGACGCTGCGCGGCCGGGGCTCGACCACCT ATATCCAGCTGCGCGGGAAGATCGAGCTTTTCGTGCGCTCCAAGCCCGGGCTGTACAAGGCCGTGCAGGGCGTGATGCGG CGATTTCGGCGGTTGAAGAATTGA
Upstream 100 bases:
>100_bases ATCCAAACCAGGGCTGCTCAATGTGGCCCAGAGACTGATGCGAGGTTTGCGGCGTTCGCGTGGAGGACGTTGAGTGCAGG CCTGAACGACGGAGAAGTAC
Downstream 100 bases:
>100_bases AGAATTGAAGAACGGCTCCCGAAGCGGCTTCGGGAGCAGGAATTGATGGCCGTGCGCGACAACTGACGGCTCACAGCGTC TCGGTGTCGAAGAGCAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MTGQAVRIVAVGDAPGQPLSPIIAGWGAAARFAARLHTSFDSVRPLWLRLEATGVCTGHQGLAWVEGIANRLMPKSAELL VVEVNDAATGAPVMLLPLMRRRAMGHYVIEWLSCGVCDYSAPLLADARPWTTQSADAAWAAVRAVLPPTDRFHIEGIPRE IHGVANPLALLSQARDSIQIASSLALHGDPQTLIKRICKSSFAKNFHKHCRRFEQMGKLDLVEAETPDMVEAHFATLLEL RLNRFRELGRFDLLTQAPVVDFYRNAALQGLSDGSVRLFGLRVGEAYLAVMYVLVMKGTLHALLLGIDHDAVANASPGLT TIGKLMMWGVAQGLDCFDLSVGSQGYKQHIGASSAVLAELCEAVTLRGRGSTTYIQLRGKIELFVRSKPGLYKAVQGVMR RFRRLKN
Sequences:
>Translated_407_residues MTGQAVRIVAVGDAPGQPLSPIIAGWGAAARFAARLHTSFDSVRPLWLRLEATGVCTGHQGLAWVEGIANRLMPKSAELL VVEVNDAATGAPVMLLPLMRRRAMGHYVIEWLSCGVCDYSAPLLADARPWTTQSADAAWAAVRAVLPPTDRFHIEGIPRE IHGVANPLALLSQARDSIQIASSLALHGDPQTLIKRICKSSFAKNFHKHCRRFEQMGKLDLVEAETPDMVEAHFATLLEL RLNRFRELGRFDLLTQAPVVDFYRNAALQGLSDGSVRLFGLRVGEAYLAVMYVLVMKGTLHALLLGIDHDAVANASPGLT TIGKLMMWGVAQGLDCFDLSVGSQGYKQHIGASSAVLAELCEAVTLRGRGSTTYIQLRGKIELFVRSKPGLYKAVQGVMR RFRRLKN >Mature_406_residues TGQAVRIVAVGDAPGQPLSPIIAGWGAAARFAARLHTSFDSVRPLWLRLEATGVCTGHQGLAWVEGIANRLMPKSAELLV VEVNDAATGAPVMLLPLMRRRAMGHYVIEWLSCGVCDYSAPLLADARPWTTQSADAAWAAVRAVLPPTDRFHIEGIPREI HGVANPLALLSQARDSIQIASSLALHGDPQTLIKRICKSSFAKNFHKHCRRFEQMGKLDLVEAETPDMVEAHFATLLELR LNRFRELGRFDLLTQAPVVDFYRNAALQGLSDGSVRLFGLRVGEAYLAVMYVLVMKGTLHALLLGIDHDAVANASPGLTT IGKLMMWGVAQGLDCFDLSVGSQGYKQHIGASSAVLAELCEAVTLRGRGSTTYIQLRGKIELFVRSKPGLYKAVQGVMRR FRRLKN
Specific function: Unknown
COG id: COG5653
COG function: function code M; Protein involved in cellulose biosynthesis (CelD)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44410; Mature: 44279
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGQAVRIVAVGDAPGQPLSPIIAGWGAAARFAARLHTSFDSVRPLWLRLEATGVCTGHQ CCCCEEEEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCC GLAWVEGIANRLMPKSAELLVVEVNDAATGAPVMLLPLMRRRAMGHYVIEWLSCGVCDYS CHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC APLLADARPWTTQSADAAWAAVRAVLPPTDRFHIEGIPREIHGVANPLALLSQARDSIQI CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH ASSLALHGDPQTLIKRICKSSFAKNFHKHCRRFEQMGKLDLVEAETPDMVEAHFATLLEL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHH RLNRFRELGRFDLLTQAPVVDFYRNAALQGLSDGSVRLFGLRVGEAYLAVMYVLVMKGTL HHHHHHHCCCHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH HALLLGIDHDAVANASPGLTTIGKLMMWGVAQGLDCFDLSVGSQGYKQHIGASSAVLAEL HHHHEECCCHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCHHHHHHHH CEAVTLRGRGSTTYIQLRGKIELFVRSKPGLYKAVQGVMRRFRRLKN HHHHEECCCCCEEEEEEECEEEEEEECCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TGQAVRIVAVGDAPGQPLSPIIAGWGAAARFAARLHTSFDSVRPLWLRLEATGVCTGHQ CCCEEEEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCC GLAWVEGIANRLMPKSAELLVVEVNDAATGAPVMLLPLMRRRAMGHYVIEWLSCGVCDYS CHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC APLLADARPWTTQSADAAWAAVRAVLPPTDRFHIEGIPREIHGVANPLALLSQARDSIQI CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH ASSLALHGDPQTLIKRICKSSFAKNFHKHCRRFEQMGKLDLVEAETPDMVEAHFATLLEL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHH RLNRFRELGRFDLLTQAPVVDFYRNAALQGLSDGSVRLFGLRVGEAYLAVMYVLVMKGTL HHHHHHHCCCHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH HALLLGIDHDAVANASPGLTTIGKLMMWGVAQGLDCFDLSVGSQGYKQHIGASSAVLAEL HHHHEECCCHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCHHHHHHHH CEAVTLRGRGSTTYIQLRGKIELFVRSKPGLYKAVQGVMRRFRRLKN HHHHEECCCCCEEEEEEECEEEEEEECCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA