Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13471945

Identifier: 13471945

GI number: 13471945

Start: 1700089

End: 1700313

Strand: Reverse

Name: 13471945

Synonym: msl2078

Alternate gene names: NA

Gene position: 1700313-1700089 (Counterclockwise)

Preceding gene: 13471947

Following gene: 13471944

Centisome position: 24.17

GC content: 66.22

Gene sequence:

>225_bases
ATGTTCAGTCCCGTCACCGGCCAGAATGCCAAGCGCGCCGCGGTGCGCAAGGCGCTCGACCGCCACAAGGTCTACATCAC
CGCGCAAAGCTTTTCGGACGGTGCCTACCGTGCACGCGTGCTGGTCGACGGCGAGGCTTATTGGGTGGATGAGTTCCGGC
TGAGCCAGCTGCAGCAGGGCCTGTCGCCGGCCGAGCTCGAGCTGACGCCGGCTGCCGACGATTGA

Upstream 100 bases:

>100_bases
ACCAAGGGTCGGCTCCGGCGCTTGAAATTGACAGGACAGCTAGTCTCCGTCATCCTTGAGCCCAGTCGCCCGATGTGTCA
GGGCGACCGAGGGCAGCGTC

Downstream 100 bases:

>100_bases
CAGCGTGACTGCCATCCGTTCCGGAACGCGGCGGTTGCTCCTGCTTGCCAAGCGCTTCGGGCGCTGACCCATGCCTGCTC
CCGCCAAACTCAAGACCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MFSPVTGQNAKRAAVRKALDRHKVYITAQSFSDGAYRARVLVDGEAYWVDEFRLSQLQQGLSPAELELTPAADD

Sequences:

>Translated_74_residues
MFSPVTGQNAKRAAVRKALDRHKVYITAQSFSDGAYRARVLVDGEAYWVDEFRLSQLQQGLSPAELELTPAADD
>Mature_74_residues
MFSPVTGQNAKRAAVRKALDRHKVYITAQSFSDGAYRARVLVDGEAYWVDEFRLSQLQQGLSPAELELTPAADD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8227; Mature: 8227

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSPVTGQNAKRAAVRKALDRHKVYITAQSFSDGAYRARVLVDGEAYWVDEFRLSQLQQG
CCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCEEEEEEECCCEEEEHHHHHHHHHCC
LSPAELELTPAADD
CCCCEEEEECCCCC
>Mature Secondary Structure
MFSPVTGQNAKRAAVRKALDRHKVYITAQSFSDGAYRARVLVDGEAYWVDEFRLSQLQQG
CCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCEEEEEEECCCEEEEHHHHHHHHHCC
LSPAELELTPAADD
CCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA