Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471928
Identifier: 13471928
GI number: 13471928
Start: 1683738
End: 1684037
Strand: Reverse
Name: 13471928
Synonym: msl2054
Alternate gene names: NA
Gene position: 1684037-1683738 (Counterclockwise)
Preceding gene: 13471929
Following gene: 13471926
Centisome position: 23.93
GC content: 60.67
Gene sequence:
>300_bases ATGAAACATTATCTTTCGAGTGCGGCAGCCGCGATCATCCTGATGGGCGGCATCGGTACGGCTCTGGCGGACACCATCGT CGTCCAGCCGGAGCAGGAGACGGTGGTTCGCGAATACGTCAAGAAACAGCCGCTGGCGTCGGTCAATCTGCTGGGCCTCG AGCTCAAGCTCGGCTCGCCGGTGCCCGACAAGGTCGAACTGCGCGAAGTGCCTAACGTCAAGTATCGCGTCGCCGTGATC AACGACCAGACTGTCCTGGTCGACCCGGAGACCCGTCAGATCGTCGAAGTGCTGCACTAA
Upstream 100 bases:
>100_bases GAAAGCCGTACATCTATTCCACAAATTGGAGTGGAACCTTGCGGTGACGTCAGAGTTTTCCTCAAGGGCGGAACCCAGAT AGCTACCAAGGAGGTTTGTT
Downstream 100 bases:
>100_bases CTGGTTCAACATCTGGCATTTGAAAAACCCGCTACCAATCTGGTGGCGGGTTTTTCTTGTCAGCCTTGCCGCCGCCTATT CGGCGGCGAGCTTGTCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MKHYLSSAAAAIILMGGIGTALADTIVVQPEQETVVREYVKKQPLASVNLLGLELKLGSPVPDKVELREVPNVKYRVAVI NDQTVLVDPETRQIVEVLH
Sequences:
>Translated_99_residues MKHYLSSAAAAIILMGGIGTALADTIVVQPEQETVVREYVKKQPLASVNLLGLELKLGSPVPDKVELREVPNVKYRVAVI NDQTVLVDPETRQIVEVLH >Mature_99_residues MKHYLSSAAAAIILMGGIGTALADTIVVQPEQETVVREYVKKQPLASVNLLGLELKLGSPVPDKVELREVPNVKYRVAVI NDQTVLVDPETRQIVEVLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10828; Mature: 10828
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHYLSSAAAAIILMGGIGTALADTIVVQPEQETVVREYVKKQPLASVNLLGLELKLGSP CCCHHHHHHEEEEEECCCCHHHHCEEEECCCHHHHHHHHHHHCCCCCEEEEEEEEECCCC VPDKVELREVPNVKYRVAVINDQTVLVDPETRQIVEVLH CCCCEEEECCCCCEEEEEEECCCEEEECCCHHHHHHHHC >Mature Secondary Structure MKHYLSSAAAAIILMGGIGTALADTIVVQPEQETVVREYVKKQPLASVNLLGLELKLGSP CCCHHHHHHEEEEEECCCCHHHHCEEEECCCHHHHHHHHHHHCCCCCEEEEEEEEECCCC VPDKVELREVPNVKYRVAVINDQTVLVDPETRQIVEVLH CCCCEEEECCCCCEEEEEEECCCEEEECCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA