Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471922
Identifier: 13471922
GI number: 13471922
Start: 1678806
End: 1679279
Strand: Reverse
Name: 13471922
Synonym: mll2045
Alternate gene names: NA
Gene position: 1679279-1678806 (Counterclockwise)
Preceding gene: 13471925
Following gene: 13471920
Centisome position: 23.87
GC content: 64.35
Gene sequence:
>474_bases ATGTCAGCCATGGATCTTCAGGTCAACCCGGCCAATGAGACCATCGGCACCAAGGGGCTGTCGGTCCGTTTCCTGGTGTC GGGCGAGAATTCGAATGGCAGCGTCGCCGCTTTCGAACTGATGGTGCCGGGAGCGCAGCGCTTGCCCGCGCCGGCGCACA GCCACGATCATTACGAGGAAACGATCTACGGCATTGACGGGGTCCTGACCTGGACCGTGAACGGCAAGCCGATCGAGGTT GGGCCGGGGGAGGCGCTGTGCATCCCACGCGGCGCCGTGCATCGCTTCGACAATAATGGCACAAGGGATGCCAAGGCGCT GTGCGTCATCACGCCGGCGGCAATTGGTCCGGACTATTTCCGCGAGGCCTTCGGCTTGCTCAACGCCGCTGCCGGCGGGC CGCCTGACAAAGCTGCGATGATGGAGATCATGCGCCGCCATGGCCTGACGCCGGCAATGCCACCACCGGCCTGA
Upstream 100 bases:
>100_bases GTCTTGGTCTGCAGGACTTCGGCTGAGGTGGCCATTGACGATCCGGTAAATTGAGTTTACTGATGGCTAGTAAATGTAAT TTACCGGAGGGGTTTGCGCA
Downstream 100 bases:
>100_bases TGCCGGCCGAAGGGCAGGGCGCGCCCCTTATTCCTGGCAAGCGGCGAAGGCGTCGCCCGAGTTCCAGTCCCGGAATGCGA TGGTCCGGCCTTCAGCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin 2 Barrel
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MSAMDLQVNPANETIGTKGLSVRFLVSGENSNGSVAAFELMVPGAQRLPAPAHSHDHYEETIYGIDGVLTWTVNGKPIEV GPGEALCIPRGAVHRFDNNGTRDAKALCVITPAAIGPDYFREAFGLLNAAAGGPPDKAAMMEIMRRHGLTPAMPPPA
Sequences:
>Translated_157_residues MSAMDLQVNPANETIGTKGLSVRFLVSGENSNGSVAAFELMVPGAQRLPAPAHSHDHYEETIYGIDGVLTWTVNGKPIEV GPGEALCIPRGAVHRFDNNGTRDAKALCVITPAAIGPDYFREAFGLLNAAAGGPPDKAAMMEIMRRHGLTPAMPPPA >Mature_156_residues SAMDLQVNPANETIGTKGLSVRFLVSGENSNGSVAAFELMVPGAQRLPAPAHSHDHYEETIYGIDGVLTWTVNGKPIEVG PGEALCIPRGAVHRFDNNGTRDAKALCVITPAAIGPDYFREAFGLLNAAAGGPPDKAAMMEIMRRHGLTPAMPPPA
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16531; Mature: 16400
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAMDLQVNPANETIGTKGLSVRFLVSGENSNGSVAAFELMVPGAQRLPAPAHSHDHYEE CCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCHHHCCCCCCCCCCHHH TIYGIDGVLTWTVNGKPIEVGPGEALCIPRGAVHRFDNNGTRDAKALCVITPAAIGPDYF HEECCCEEEEEEECCEEEEECCCCEEEECCCHHEECCCCCCCCCEEEEEEECCCCCHHHH REAFGLLNAAAGGPPDKAAMMEIMRRHGLTPAMPPPA HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SAMDLQVNPANETIGTKGLSVRFLVSGENSNGSVAAFELMVPGAQRLPAPAHSHDHYEE CCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCHHHCCCCCCCCCCHHH TIYGIDGVLTWTVNGKPIEVGPGEALCIPRGAVHRFDNNGTRDAKALCVITPAAIGPDYF HEECCCEEEEEEECCEEEEECCCCEEEECCCHHEECCCCCCCCCEEEEEEECCCCCHHHH REAFGLLNAAAGGPPDKAAMMEIMRRHGLTPAMPPPA HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA