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The map label for this gene is glxA [H]

Identifier: 13471906

GI number: 13471906

Start: 1663369

End: 1664349

Strand: Reverse

Name: glxA [H]

Synonym: mll2026

Alternate gene names: 13471906

Gene position: 1664349-1663369 (Counterclockwise)

Preceding gene: 13471911

Following gene: 13471900

Centisome position: 23.65

GC content: 65.34

Gene sequence:

>981_bases
ATGGCAAGACGGTTTGCGTTTCTCCTGGTGCGCGACTTCACGCTGTCGCCGCTGTCACTGTTCATCGACACGCTGCGGCT
GGCGGGTGACGAGGGCGATCGCAGCCGCAGGATCGAGTTCGACTGGGAGATCGTCGGCGAACGCGGCCTGCCGATCCGGG
CGAGTTGCGGTGTCGAATTGCTGCCCACCAAGGGGATCGGCAATCCTGAGGATTTCGACAACATCGTGGTGGTCGGCGGC
CTGCTCGACACCAACCGCAGCCTGAGTTCCGACAAGGAGGTCTTCCTGTTGCGGGCGGCCGAGAAGGGGGTGCCGCTGAC
GGCGCTGTGCACGGGAAGCTTCGTGCTGGCGCGCTACGGCCTGCTCGACGGCTACGCCGCGGCCGTCAGCTGGTTCCACA
TCAAGGATTTCCGTAGCCAGTTCCCCGATGTCAACGCGCATGCCGACAGCCTGTTTTCCGTCGACCGCGGCCGCTCGACC
TGCGCCGGCGGCACGGGTGCGGCCGACCTTGCCGGCTATTTCGTGTCCCAGTTCATCGGCCAGAAGGCGGCGGAAAAGGC
CGCCAAGATCCTGGTGCTCGACCGCATCAGGAGCAGCCGGGACGTGCAGCCCGTCGGTGACCTGTTTCCGGCAGCGTCGA
GCCGGTCGGTCAAGCGTGCCTTGCTGTTGATGGAGAGCAACCTGCAGGAGACGCTGTCGGTCGCCGAGATCGCAACCCGC
CTGAATTGCTCACGGCGCCAGCTCGAGCGGCTTTTCGGCACCGAACTCGGCATCGGTCCGATGGCGGCCTATCTGGCGCT
GAGAGTGCATCATGCCAAGTCGCTGCTCGAAGGCAGCGACCTGCAGATCGGTGACATCGCCTATCGCTGCGGCTTCACCA
ATGCCGGCCATTTCAGCCGCGTCTTCCGCCAGCAGACCGGCATCACGCCAACCCATCTCAGGCATCCCAACCGCCTGGCG
AGCGTCTCGGCGGGGCAATGA

Upstream 100 bases:

>100_bases
TCATCGAACGACTGTAGTAGAAAACGCTTAAATTTGCCCTTCCAGGCTGGTGGTAAGTTGCGGCATCGGCTAAGGCGGGC
GAACGAGTTGCGGAAGTATA

Downstream 100 bases:

>100_bases
AGCCGGCCGCGTAGCGCCGCTCGAGCCGGGCCGGCTCCTGGGCGACTTGCGTCACGAAATGCGCTGACCGTCCTCATCGA
GCAGAACGCAGCCTTCGGGA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MARRFAFLLVRDFTLSPLSLFIDTLRLAGDEGDRSRRIEFDWEIVGERGLPIRASCGVELLPTKGIGNPEDFDNIVVVGG
LLDTNRSLSSDKEVFLLRAAEKGVPLTALCTGSFVLARYGLLDGYAAAVSWFHIKDFRSQFPDVNAHADSLFSVDRGRST
CAGGTGAADLAGYFVSQFIGQKAAEKAAKILVLDRIRSSRDVQPVGDLFPAASSRSVKRALLLMESNLQETLSVAEIATR
LNCSRRQLERLFGTELGIGPMAAYLALRVHHAKSLLEGSDLQIGDIAYRCGFTNAGHFSRVFRQQTGITPTHLRHPNRLA
SVSAGQ

Sequences:

>Translated_326_residues
MARRFAFLLVRDFTLSPLSLFIDTLRLAGDEGDRSRRIEFDWEIVGERGLPIRASCGVELLPTKGIGNPEDFDNIVVVGG
LLDTNRSLSSDKEVFLLRAAEKGVPLTALCTGSFVLARYGLLDGYAAAVSWFHIKDFRSQFPDVNAHADSLFSVDRGRST
CAGGTGAADLAGYFVSQFIGQKAAEKAAKILVLDRIRSSRDVQPVGDLFPAASSRSVKRALLLMESNLQETLSVAEIATR
LNCSRRQLERLFGTELGIGPMAAYLALRVHHAKSLLEGSDLQIGDIAYRCGFTNAGHFSRVFRQQTGITPTHLRHPNRLA
SVSAGQ
>Mature_325_residues
ARRFAFLLVRDFTLSPLSLFIDTLRLAGDEGDRSRRIEFDWEIVGERGLPIRASCGVELLPTKGIGNPEDFDNIVVVGGL
LDTNRSLSSDKEVFLLRAAEKGVPLTALCTGSFVLARYGLLDGYAAAVSWFHIKDFRSQFPDVNAHADSLFSVDRGRSTC
AGGTGAADLAGYFVSQFIGQKAAEKAAKILVLDRIRSSRDVQPVGDLFPAASSRSVKRALLLMESNLQETLSVAEIATRL
NCSRRQLERLFGTELGIGPMAAYLALRVHHAKSLLEGSDLQIGDIAYRCGFTNAGHFSRVFRQQTGITPTHLRHPNRLAS
VSAGQ

Specific function: Activator Of The L-Rhamnose Operon. Rhar Putatively Autoregulates Its Synthesis. [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI171474011, Length=128, Percent_Identity=30.46875, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 35570; Mature: 35439

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRFAFLLVRDFTLSPLSLFIDTLRLAGDEGDRSRRIEFDWEIVGERGLPIRASCGVEL
CCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEECCCEEE
LPTKGIGNPEDFDNIVVVGGLLDTNRSLSSDKEVFLLRAAEKGVPLTALCTGSFVLARYG
EECCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHH
LLDGYAAAVSWFHIKDFRSQFPDVNAHADSLFSVDRGRSTCAGGTGAADLAGYFVSQFIG
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
QKAAEKAAKILVLDRIRSSRDVQPVGDLFPAASSRSVKRALLLMESNLQETLSVAEIATR
HHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LNCSRRQLERLFGTELGIGPMAAYLALRVHHAKSLLEGSDLQIGDIAYRCGFTNAGHFSR
HCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHEEEECCCCCCHHHHH
VFRQQTGITPTHLRHPNRLASVSAGQ
HHHHHCCCCHHHCCCCCHHCCCCCCC
>Mature Secondary Structure 
ARRFAFLLVRDFTLSPLSLFIDTLRLAGDEGDRSRRIEFDWEIVGERGLPIRASCGVEL
CCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEECCCEEE
LPTKGIGNPEDFDNIVVVGGLLDTNRSLSSDKEVFLLRAAEKGVPLTALCTGSFVLARYG
EECCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHH
LLDGYAAAVSWFHIKDFRSQFPDVNAHADSLFSVDRGRSTCAGGTGAADLAGYFVSQFIG
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
QKAAEKAAKILVLDRIRSSRDVQPVGDLFPAASSRSVKRALLLMESNLQETLSVAEIATR
HHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LNCSRRQLERLFGTELGIGPMAAYLALRVHHAKSLLEGSDLQIGDIAYRCGFTNAGHFSR
HCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHEEEECCCCCCHHHHH
VFRQQTGITPTHLRHPNRLASVSAGQ
HHHHHCCCCHHHCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]