Click here to switch to the map view.

The map label for this gene is 13471900

Identifier: 13471900

GI number: 13471900

Start: 1659105

End: 1659296

Strand: Reverse

Name: 13471900

Synonym: msl2020

Alternate gene names: NA

Gene position: 1659296-1659105 (Counterclockwise)

Preceding gene: 13471906

Following gene: 13471898

Centisome position: 23.58

GC content: 65.1

Gene sequence:

>192_bases
ATGAGCACCCGGTGCGCTTTCTTTGAAGCGCCTGTTTTGTTCCCGGGGCCAAGATTGGGTGATTGGTGGCCCGATGTCTA
CACCAGGCGATTGAGCCAGCGGACATCGGGCGCGTCGCCGGCTGCGATGGACGCCGTGTCGGCGGACGGCATCGCGGCGG
CGCCGGCATGGCCGTTCGATCTGGTAGGTTGA

Upstream 100 bases:

>100_bases
CACGGCGATCGGCAGCACCAGGAAGAAGATCAGCAGCAGGAGCACCGGCGCGACCAGCAGCCACGCCAGCCGTGGATCAT
ACAATGTCCATTGTCGTTTC

Downstream 100 bases:

>100_bases
ATTTGCCGGCGGCTTCTATGCCGGCAGGCCGGCCAGCCGCATGGCCTCGGTGACGTCGTCGATGATAGCAGGCGCGAGAC
CGACGGCGGCGGACCAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MSTRCAFFEAPVLFPGPRLGDWWPDVYTRRLSQRTSGASPAAMDAVSADGIAAAPAWPFDLVG

Sequences:

>Translated_63_residues
MSTRCAFFEAPVLFPGPRLGDWWPDVYTRRLSQRTSGASPAAMDAVSADGIAAAPAWPFDLVG
>Mature_62_residues
STRCAFFEAPVLFPGPRLGDWWPDVYTRRLSQRTSGASPAAMDAVSADGIAAAPAWPFDLVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6756; Mature: 6624

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTRCAFFEAPVLFPGPRLGDWWPDVYTRRLSQRTSGASPAAMDAVSADGIAAAPAWPFD
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
LVG
CCC
>Mature Secondary Structure 
STRCAFFEAPVLFPGPRLGDWWPDVYTRRLSQRTSGASPAAMDAVSADGIAAAPAWPFD
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
LVG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA