Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471895
Identifier: 13471895
GI number: 13471895
Start: 1653441
End: 1653602
Strand: Reverse
Name: 13471895
Synonym: msl2015
Alternate gene names: NA
Gene position: 1653602-1653441 (Counterclockwise)
Preceding gene: 13471898
Following gene: 13471894
Centisome position: 23.5
GC content: 58.02
Gene sequence:
>162_bases ATGACCGTCCAGACCAACCGCATGACAGAACCTTTCTTCGTGGCGGATCAACAGGCCAGGCAGCCATCGGGCAGCTTTGC GGCTATTGCGCGGCAGAAAACGCCGAGGCGAAACATCCCGATCGGGGAGGCATGGCAAGTGCCGCCATTAACCATCAGTT AA
Upstream 100 bases:
>100_bases GCTCTCCATCGCCGCGATGTCGGCAATCGCCTTGTCGCGCGCGGCGATATAATCGTCCTCGGGCGAGGCCGCGAAGGCAG CACTGCTCGCCAGTGCAAAC
Downstream 100 bases:
>100_bases CTATCCGGTCGCCTTTGAATCAAATTTGACGGATACTCTTTCCAGGCCAAACGAGGCTGCTCGAGAGGCCGGAGAAGACA GCAATCATAAGCTTGGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 53; Mature: 52
Protein sequence:
>53_residues MTVQTNRMTEPFFVADQQARQPSGSFAAIARQKTPRRNIPIGEAWQVPPLTIS
Sequences:
>Translated_53_residues MTVQTNRMTEPFFVADQQARQPSGSFAAIARQKTPRRNIPIGEAWQVPPLTIS >Mature_52_residues TVQTNRMTEPFFVADQQARQPSGSFAAIARQKTPRRNIPIGEAWQVPPLTIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5941; Mature: 5810
Theoretical pI: Translated: 11.93; Mature: 11.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVQTNRMTEPFFVADQQARQPSGSFAAIARQKTPRRNIPIGEAWQVPPLTIS CCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEECC >Mature Secondary Structure TVQTNRMTEPFFVADQQARQPSGSFAAIARQKTPRRNIPIGEAWQVPPLTIS CCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA