Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471898
Identifier: 13471898
GI number: 13471898
Start: 1656651
End: 1657352
Strand: Reverse
Name: 13471898
Synonym: mll2018
Alternate gene names: NA
Gene position: 1657352-1656651 (Counterclockwise)
Preceding gene: 13471900
Following gene: 13471895
Centisome position: 23.56
GC content: 66.95
Gene sequence:
>702_bases ATGTCCAAGAACGCAGCAAATTCCGTCGTCCTCGTTCATGGTGGCTTCGTCGATGGCTCCGGCTGGGAAGGGGTCTACCA CCAGCTCAAGAAGGATGGCTACGACGTCACCATCGTCCAGAACCCGACCACCTCGCTCGCCGACGATGTCGCTGTCACCA GGCGCGCCATCGCAGCCGCTCCCGGCAATGTCATCCTGGTCGGCCACTCCTATGGCGGCGTCGTGGTGTCGGAAGCCGGC ACCGATCCCAAGGTGGCTGGTGTCGTCTATATCGCGGCCTTCGCGGCGGATGCCGGCGAGTCGGTCTCGACCCTCATCGC CAACCCCCCTCCCGGCGCTTCGGTACCGCCGATCCTGCCGCCCGTCGACGGCTTCCTGATGCTCGACAAGGCCAAGTTCG CCGCCTCGTTCGCCGCGGATGTGCGCCCCTCGCTCGCCTCCTTCATGGCGGACTCGCAGGTGCCGTGGGGCGTGGCCGCA CTCGAAGGCAAGGTCACCAAGCCGGCCTGGAGAGTGAAGCCGAGCTGGTATCTGGTCGCCACCGACGATCACATGATCCC GCCGCCGGCACAGCGCCAGATGGCGAGCCGGGCCGGCGCGACGACGGTGGAAGTGCCCGGCAGTCACGCGGTCTATGTCT CCGATCCGGCTGCGGTCGCCAAGCTCATCGAACAGGCCGCCGCCAGCGTCGGCAAGAACTGA
Upstream 100 bases:
>100_bases ATCAAGAGGTCCTGAAGGCCGCCTCAAAGCGAGCGCGGCGGCTGCGTCGCATAGTCCTCCTGCAACCAACGCAAACAACA CTTTGAAAAGGAGAACTCAA
Downstream 100 bases:
>100_bases GAAGGCATCATCGCAGAAAAGCCTGGGTGCTTGGCGGCACCCAGGCTTTTTAGCACTCGCTGGAGGCGAAACGTCGCCGG AGCGTCCGGGGCGATCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase Protein; Signal Peptide Protein; Alpha/Beta Hydrolase Fold; Esterase/Lipase/Thioesterase Domain-Containing Protein; Hydrolases Or Acyltransferases; Hydrolase; Hydrolase Or Acyltransferase; Alpha/Beta Hydrolase; Esterase; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Superfamily Protein; Alpha/Beta Hydrolase Family Protein; Polyneuridine-Aldehyde Esterase; Lipase; Conserved Protein; Alpha/Beta Hydrolase Fold Containing Protein; Extracytoplasmic Hydrolase
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MSKNAANSVVLVHGGFVDGSGWEGVYHQLKKDGYDVTIVQNPTTSLADDVAVTRRAIAAAPGNVILVGHSYGGVVVSEAG TDPKVAGVVYIAAFAADAGESVSTLIANPPPGASVPPILPPVDGFLMLDKAKFAASFAADVRPSLASFMADSQVPWGVAA LEGKVTKPAWRVKPSWYLVATDDHMIPPPAQRQMASRAGATTVEVPGSHAVYVSDPAAVAKLIEQAAASVGKN
Sequences:
>Translated_233_residues MSKNAANSVVLVHGGFVDGSGWEGVYHQLKKDGYDVTIVQNPTTSLADDVAVTRRAIAAAPGNVILVGHSYGGVVVSEAG TDPKVAGVVYIAAFAADAGESVSTLIANPPPGASVPPILPPVDGFLMLDKAKFAASFAADVRPSLASFMADSQVPWGVAA LEGKVTKPAWRVKPSWYLVATDDHMIPPPAQRQMASRAGATTVEVPGSHAVYVSDPAAVAKLIEQAAASVGKN >Mature_232_residues SKNAANSVVLVHGGFVDGSGWEGVYHQLKKDGYDVTIVQNPTTSLADDVAVTRRAIAAAPGNVILVGHSYGGVVVSEAGT DPKVAGVVYIAAFAADAGESVSTLIANPPPGASVPPILPPVDGFLMLDKAKFAASFAADVRPSLASFMADSQVPWGVAAL EGKVTKPAWRVKPSWYLVATDDHMIPPPAQRQMASRAGATTVEVPGSHAVYVSDPAAVAKLIEQAAASVGKN
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23925; Mature: 23794
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNAANSVVLVHGGFVDGSGWEGVYHQLKKDGYDVTIVQNPTTSLADDVAVTRRAIAAA CCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCC PGNVILVGHSYGGVVVSEAGTDPKVAGVVYIAAFAADAGESVSTLIANPPPGASVPPILP CCCEEEEEECCCCEEEECCCCCCCHHHEEEEEEHHCCCCCCEEEEEECCCCCCCCCCCCC PVDGFLMLDKAKFAASFAADVRPSLASFMADSQVPWGVAALEGKVTKPAWRVKPSWYLVA CCCCEEEEEHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCEEEEE TDDHMIPPPAQRQMASRAGATTVEVPGSHAVYVSDPAAVAKLIEQAAASVGKN CCCCCCCCCHHHHHHHHCCCEEEECCCCEEEEEECHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SKNAANSVVLVHGGFVDGSGWEGVYHQLKKDGYDVTIVQNPTTSLADDVAVTRRAIAAA CCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCC PGNVILVGHSYGGVVVSEAGTDPKVAGVVYIAAFAADAGESVSTLIANPPPGASVPPILP CCCEEEEEECCCCEEEECCCCCCCHHHEEEEEEHHCCCCCCEEEEEECCCCCCCCCCCCC PVDGFLMLDKAKFAASFAADVRPSLASFMADSQVPWGVAALEGKVTKPAWRVKPSWYLVA CCCCEEEEEHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCEEEEE TDDHMIPPPAQRQMASRAGATTVEVPGSHAVYVSDPAAVAKLIEQAAASVGKN CCCCCCCCCHHHHHHHHCCCEEEECCCCEEEEEECHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA