Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471872
Identifier: 13471872
GI number: 13471872
Start: 1630476
End: 1630691
Strand: Reverse
Name: 13471872
Synonym: msl1985
Alternate gene names: NA
Gene position: 1630691-1630476 (Counterclockwise)
Preceding gene: 13471873
Following gene: 13471869
Centisome position: 23.18
GC content: 52.31
Gene sequence:
>216_bases ATGACCCAGGCAAGAATTGTGACTTTTCGCCTATTTGTGGGTGGGAAGGCTTCAATTCCTACGTGGTTCAATGCTGACGC CATTGTCGAAGTACATGAAACGAAAACCGGTCATTGCGCTATCATTGCGGAAAATGGCACGTTCACACTTGTCGCCGAGA CCTACCAGCAGGTCCTCGCGGCCCTTGCGGCGGCAACGGTGATCTTATCCTCGTGA
Upstream 100 bases:
>100_bases GTATGTCGACAGACATACTTAAAAGTCGGGGACTAGCATAATTTGTAGCAATTGGAGCGATGAAACGGCCGAGACGGCAG AAGTTATCGCCGCGCGAATA
Downstream 100 bases:
>100_bases CGTAGCAAGAAGGTCGAGGCTGTCCCACTCACGAACCCCTCGCTTTGGTCTACCTCCAATTTTGCGAGCACTGAACTGGA TGAGAATGGGGGCCGTCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MTQARIVTFRLFVGGKASIPTWFNADAIVEVHETKTGHCAIIAENGTFTLVAETYQQVLAALAAATVILSS
Sequences:
>Translated_71_residues MTQARIVTFRLFVGGKASIPTWFNADAIVEVHETKTGHCAIIAENGTFTLVAETYQQVLAALAAATVILSS >Mature_70_residues TQARIVTFRLFVGGKASIPTWFNADAIVEVHETKTGHCAIIAENGTFTLVAETYQQVLAALAAATVILSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7566; Mature: 7435
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQARIVTFRLFVGGKASIPTWFNADAIVEVHETKTGHCAIIAENGTFTLVAETYQQVLA CCCCEEEEEEEEECCCCCCCCEECCCEEEEEECCCCCEEEEEECCCCEEEEHHHHHHHHH ALAAATVILSS HHHHHHHEECC >Mature Secondary Structure TQARIVTFRLFVGGKASIPTWFNADAIVEVHETKTGHCAIIAENGTFTLVAETYQQVLA CCCEEEEEEEEECCCCCCCCEECCCEEEEEECCCCCEEEEEECCCCEEEEHHHHHHHHH ALAAATVILSS HHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA