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The map label for this gene is rbsB [H]

Identifier: 13471819

GI number: 13471819

Start: 1575687

End: 1576721

Strand: Reverse

Name: rbsB [H]

Synonym: mll1918

Alternate gene names: 13471819

Gene position: 1576721-1575687 (Counterclockwise)

Preceding gene: 13471820

Following gene: 13471818

Centisome position: 22.41

GC content: 62.9

Gene sequence:

>1035_bases
ATGGCGACGCTCGGTCCCAAGGGCATTGTCGGCCAGGGCCCGCATGGCGAGAAGGCAGCCTCGCCCGACGAGCTGAAACT
GACCGATGACGAAGCCGCCAAGGTCAAGGCCGGCAAGTTCAAGGTCGGCATTTCCATGCAGACGGTGAACCTCGACTGGT
CGCAGCTGCAGGTGCAAGGCATCAGCGAAACGCTGGCCAAATATGGCGTCACCGTCACCGGCGTGGCGTCGGCCGAATAT
CAGGTCGACAAGCAGATCGCCGACATCGAGAACACCATCCAGCAGCACCCCGACGGCATCATCTCCATCCCCGTCGATTT
CACCGCGACGGCGCCGACCTACAAGAAGGTGGGCGAAGCCGGCATCAAGCTGGTGTTCATGGACAGCATTCCGGTTGGCC
TCTCATCGCCAAAGGATTTTGCCTCGATGATCTCGGCCGACAGCCAGGGTAACGGCCAGATCGCGGCGCAGATCCTGGCC
TCCTGCATGCCCAAGGGCGGCACGATCGGCCTGGTGAATTTCGGTGTCGACTATTTCAGCACCAATGAGCGCACCAAGGG
CGTCGGCGAGTGGATGAAGAAGAACCGGCCCGACATCGTGCTGAAGCAGGTCGACTTCACCGATCCCTCGAAGGTCTCGC
AGATCTCCGGCGACTTCCTCACCGGCAATCCCGATGTGAAAGGCCTGTTTGCGGTGTGGGATCAGCCGGCGCTCGACACG
CTGTCCTCGATGCGGGCGCAAGGCATCGACATTCCGATCACCACGGTCGATCTCGGCCTGCAATCGGCGATCGAGATCGC
CAAGGGCGGCCCGCTCAAGGCAACCGGCTCGCAGCGCCCCTATGACCAGGGCGTGGCCGAGGCGCTGGCGATGATGAAGG
CGCTGATCGGGCAACCCACGCCCGCCTGGGTCGGCGTGCAGTCGCTGCCGGTGGTGCAATCCAACGTGCTGGAATCCTTC
AAGACCGTCTTCCACAAGGATCCGCCGGCCGAGCTGGTCGACGCCTGCAACAGCGCCAAGCCGAAGTGCAATTGA

Upstream 100 bases:

>100_bases
AATCCTGTTCAGTACATTGAGCCTCGCCGCCAGCGCCTTCGCGCTGTCGACGTCCATGAGTTTGGCGCAGACGCCGGACA
CCTGCGTCACCGGCGTCGAC

Downstream 100 bases:

>100_bases
GGTAATTGCGTGGGCGCGGGAGAGATCCCGCGCCCATGAGCGGCTTGCCCGTGCGGGCCGCCAAATCGTGCCAATTTTTG
GCTGGAGAAGCGGCTACGCC

Product: sugar binding protein of sugar ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MATLGPKGIVGQGPHGEKAASPDELKLTDDEAAKVKAGKFKVGISMQTVNLDWSQLQVQGISETLAKYGVTVTGVASAEY
QVDKQIADIENTIQQHPDGIISIPVDFTATAPTYKKVGEAGIKLVFMDSIPVGLSSPKDFASMISADSQGNGQIAAQILA
SCMPKGGTIGLVNFGVDYFSTNERTKGVGEWMKKNRPDIVLKQVDFTDPSKVSQISGDFLTGNPDVKGLFAVWDQPALDT
LSSMRAQGIDIPITTVDLGLQSAIEIAKGGPLKATGSQRPYDQGVAEALAMMKALIGQPTPAWVGVQSLPVVQSNVLESF
KTVFHKDPPAELVDACNSAKPKCN

Sequences:

>Translated_344_residues
MATLGPKGIVGQGPHGEKAASPDELKLTDDEAAKVKAGKFKVGISMQTVNLDWSQLQVQGISETLAKYGVTVTGVASAEY
QVDKQIADIENTIQQHPDGIISIPVDFTATAPTYKKVGEAGIKLVFMDSIPVGLSSPKDFASMISADSQGNGQIAAQILA
SCMPKGGTIGLVNFGVDYFSTNERTKGVGEWMKKNRPDIVLKQVDFTDPSKVSQISGDFLTGNPDVKGLFAVWDQPALDT
LSSMRAQGIDIPITTVDLGLQSAIEIAKGGPLKATGSQRPYDQGVAEALAMMKALIGQPTPAWVGVQSLPVVQSNVLESF
KTVFHKDPPAELVDACNSAKPKCN
>Mature_343_residues
ATLGPKGIVGQGPHGEKAASPDELKLTDDEAAKVKAGKFKVGISMQTVNLDWSQLQVQGISETLAKYGVTVTGVASAEYQ
VDKQIADIENTIQQHPDGIISIPVDFTATAPTYKKVGEAGIKLVFMDSIPVGLSSPKDFASMISADSQGNGQIAAQILAS
CMPKGGTIGLVNFGVDYFSTNERTKGVGEWMKKNRPDIVLKQVDFTDPSKVSQISGDFLTGNPDVKGLFAVWDQPALDTL
SSMRAQGIDIPITTVDLGLQSAIEIAKGGPLKATGSQRPYDQGVAEALAMMKALIGQPTPAWVGVQSLPVVQSNVLESFK
TVFHKDPPAELVDACNSAKPKCN

Specific function: Involved in the high-affinity D-ribose membrane transport system [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 36359; Mature: 36228

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLGPKGIVGQGPHGEKAASPDELKLTDDEAAKVKAGKFKVGISMQTVNLDWSQLQVQG
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHEECCEEEEEEEEEEECCCHHHHHHHH
ISETLAKYGVTVTGVASAEYQVDKQIADIENTIQQHPDGIISIPVDFTATAPTYKKVGEA
HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHCC
GIKLVFMDSIPVGLSSPKDFASMISADSQGNGQIAAQILASCMPKGGTIGLVNFGVDYFS
CEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHCC
TNERTKGVGEWMKKNRPDIVLKQVDFTDPSKVSQISGDFLTGNPDVKGLFAVWDQPALDT
CCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCCCEEECCCCCCEEEEECCCHHHHH
LSSMRAQGIDIPITTVDLGLQSAIEIAKGGPLKATGSQRPYDQGVAEALAMMKALIGQPT
HHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PAWVGVQSLPVVQSNVLESFKTVFHKDPPAELVDACNSAKPKCN
CCEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ATLGPKGIVGQGPHGEKAASPDELKLTDDEAAKVKAGKFKVGISMQTVNLDWSQLQVQG
CCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHEECCEEEEEEEEEEECCCHHHHHHHH
ISETLAKYGVTVTGVASAEYQVDKQIADIENTIQQHPDGIISIPVDFTATAPTYKKVGEA
HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHCC
GIKLVFMDSIPVGLSSPKDFASMISADSQGNGQIAAQILASCMPKGGTIGLVNFGVDYFS
CEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHCC
TNERTKGVGEWMKKNRPDIVLKQVDFTDPSKVSQISGDFLTGNPDVKGLFAVWDQPALDT
CCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCCCEEECCCCCCEEEEECCCHHHHH
LSSMRAQGIDIPITTVDLGLQSAIEIAKGGPLKATGSQRPYDQGVAEALAMMKALIGQPT
HHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PAWVGVQSLPVVQSNVLESFKTVFHKDPPAELVDACNSAKPKCN
CCEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377; 7921236 [H]