| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471818
Identifier: 13471818
GI number: 13471818
Start: 1575341
End: 1575619
Strand: Reverse
Name: 13471818
Synonym: msl8611
Alternate gene names: NA
Gene position: 1575619-1575341 (Counterclockwise)
Preceding gene: 13471819
Following gene: 13471817
Centisome position: 22.39
GC content: 59.5
Gene sequence:
>279_bases GTGCCAATTTTTGGCTGGAGAAGCGGCTACGCCTTCGCCTCGACGAGGATCACCAGCGATTCCGGCACCACGCCATCGTG CGCCATAGCGTCGGCGGCTGCCTTGCTCTGCATCAGCGCGGCCATCTTATCCATATCCGGCACGTCCATCATCACGGCCA CCCGTTTCGGGTTCTGCGGATCGACGAAGGTGCGGATGTTGGTGATCCCCAGCGAGCCGAAAAGCTCCTTGCGCTTGGGT GAACTGAGCCAATGCTTGCTGTCTTTCGTGATGTTGTGA
Upstream 100 bases:
>100_bases GCCTGCAACAGCGCCAAGCCGAAGTGCAATTGAGGTAATTGCGTGGGCGCGGGAGAGATCCCGCGCCCATGAGCGGCTTG CCCGTGCGGGCCGCCAAATC
Downstream 100 bases:
>100_bases TGGCCGATTACGGTTGGCATGGCATCCTCCCCGAGGTGACGCCGGCGGTCGATATCGCCCGCCTGATGCTGCGATCCACC TGTGCGAGCCAGTGAGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MPIFGWRSGYAFASTRITSDSGTTPSCAIASAAALLCISAAILSISGTSIITATRFGFCGSTKVRMLVIPSEPKSSLRLG ELSQCLLSFVML
Sequences:
>Translated_92_residues MPIFGWRSGYAFASTRITSDSGTTPSCAIASAAALLCISAAILSISGTSIITATRFGFCGSTKVRMLVIPSEPKSSLRLG ELSQCLLSFVML >Mature_91_residues PIFGWRSGYAFASTRITSDSGTTPSCAIASAAALLCISAAILSISGTSIITATRFGFCGSTKVRMLVIPSEPKSSLRLGE LSQCLLSFVML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9596; Mature: 9465
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIFGWRSGYAFASTRITSDSGTTPSCAIASAAALLCISAAILSISGTSIITATRFGFCG CCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC STKVRMLVIPSEPKSSLRLGELSQCLLSFVML CCCEEEEEECCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure PIFGWRSGYAFASTRITSDSGTTPSCAIASAAALLCISAAILSISGTSIITATRFGFCG CCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC STKVRMLVIPSEPKSSLRLGELSQCLLSFVML CCCEEEEEECCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA