| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471770
Identifier: 13471770
GI number: 13471770
Start: 1530732
End: 1531268
Strand: Reverse
Name: 13471770
Synonym: mll1853
Alternate gene names: NA
Gene position: 1531268-1530732 (Counterclockwise)
Preceding gene: 13471771
Following gene: 13471767
Centisome position: 21.76
GC content: 63.69
Gene sequence:
>537_bases ATGGACATGATATCAAATCTTCGCAACAGGCTCGTCATGGCGGGGGCCATGCTGGCCGTCTGCGCCTCCTTCGCGCAGGC GCATCAGGAAGCGGCCACCACCGAGACGGGTTCGAATCCGCTGGCCGAGAAGGTGCGGGCGGCCAACAGCCGGTTTCTCG ACGTCAAGGCGGCGACAGCCGAGGGCTATGCGCCCATTCCCTGCGCCAGCGGCATCAACGGTGGCGCCATGGGCATCCAC TACGTCAGCGGCCAGTACCTGAAGGACGACAAGATCGACATCGCCCGTCCCGAGGCCGTGATGTACGAGCCGATGGCCGA CGGCCGGCTTAAGCTGGTGGCGGTCGAATATATCACCTCGAAGGGACCGGCGTCGCTGGATGGACAGCTGTTCAACTTCA ACAGCGCCCCCAACCGCTACGGCCTGGGGGAATTCTACGAGCTGCATGTCTGGGCCTGGAAGGGCAACCCGACCGGCACT TTCGCCGACATGAACCCGAAAGTGTCGTGCGAGCACACGATGGCGCCGAGCCAGTAA
Upstream 100 bases:
>100_bases TCGATTTCGGGATCTCCAAGCAACAACAGTCACAGCGCTTGCCTTTCGCGCCGCCGTATTTCCGGCGGCCGGCCAGCTGT GCTTTTTCAAGAAGAATGGA
Downstream 100 bases:
>100_bases GCAAATAGGCCAGGCGGCGTTCACGCCGCCTGGCCTCTTTCGAAATGCGGTGGGGTGGTTCGGCGGGCCTCAGGCAATCC CGGTCATTGCGACGCCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MDMISNLRNRLVMAGAMLAVCASFAQAHQEAATTETGSNPLAEKVRAANSRFLDVKAATAEGYAPIPCASGINGGAMGIH YVSGQYLKDDKIDIARPEAVMYEPMADGRLKLVAVEYITSKGPASLDGQLFNFNSAPNRYGLGEFYELHVWAWKGNPTGT FADMNPKVSCEHTMAPSQ
Sequences:
>Translated_178_residues MDMISNLRNRLVMAGAMLAVCASFAQAHQEAATTETGSNPLAEKVRAANSRFLDVKAATAEGYAPIPCASGINGGAMGIH YVSGQYLKDDKIDIARPEAVMYEPMADGRLKLVAVEYITSKGPASLDGQLFNFNSAPNRYGLGEFYELHVWAWKGNPTGT FADMNPKVSCEHTMAPSQ >Mature_178_residues MDMISNLRNRLVMAGAMLAVCASFAQAHQEAATTETGSNPLAEKVRAANSRFLDVKAATAEGYAPIPCASGINGGAMGIH YVSGQYLKDDKIDIARPEAVMYEPMADGRLKLVAVEYITSKGPASLDGQLFNFNSAPNRYGLGEFYELHVWAWKGNPTGT FADMNPKVSCEHTMAPSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19150; Mature: 19150
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMISNLRNRLVMAGAMLAVCASFAQAHQEAATTETGSNPLAEKVRAANSRFLDVKAATA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEEECCC EGYAPIPCASGINGGAMGIHYVSGQYLKDDKIDIARPEAVMYEPMADGRLKLVAVEYITS CCCCCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCEEEECCCCCCCEEEEEEEEECC KGPASLDGQLFNFNSAPNRYGLGEFYELHVWAWKGNPTGTFADMNPKVSCEHTMAPSQ CCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCCEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MDMISNLRNRLVMAGAMLAVCASFAQAHQEAATTETGSNPLAEKVRAANSRFLDVKAATA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEEECCC EGYAPIPCASGINGGAMGIHYVSGQYLKDDKIDIARPEAVMYEPMADGRLKLVAVEYITS CCCCCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCEEEECCCCCCCEEEEEEEEECC KGPASLDGQLFNFNSAPNRYGLGEFYELHVWAWKGNPTGTFADMNPKVSCEHTMAPSQ CCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCCEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA