BacMap

Definition	Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession	NC_002678
Length	7,036,071

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The map label for this gene is fabG [H]

Identifier: 13471757

GI number: 13471757

Start: 1516333

End: 1517037

Strand: Reverse

Name: fabG [H]

Synonym: mll1830

Alternate gene names: 13471757

Gene position: 1517037-1516333 (Counterclockwise)

Preceding gene: 13471759

Following gene: 13471753

Centisome position: 21.56

GC content: 65.82

Gene sequence:

>705_bases
ATGAGTGTAGAAAAAGTGGCTGTTGTCGTGGCCGGTGGCAGCGGCATGGGGGCGGCGGCGGCCAAGCGCCTGGCGGCGGA
TGGGTTCAAGGTCGCCATTCTCTCTTCCTCGGGCAAGGGCGAGGCGCTGGCCAAGGAGCTGGGCGGGCTCGGCGTCACCG
GCTCCAACCAGTCGAGCGACGATTTGCAGCGCCTCGCCGACCTGACGCTGGAGCGTTTTGGCCGCATCGACGTGCTGGTC
AACAGCGGCGGCCACGGGCCGCGCGCGCCGATCCTGGAGATCACGGACGAGCAGTGGCGCACCGGCATGGACGTCTATCT
GATGAACGTCATCCGGCCGGTGCGCATCGTGGCGCCGCAAATGGTCAAGCAGAAGGGCGGCGCCATCATCAACATCTCGA
CGGCCTGGGTCGCCGAGCCGAACGTGATGTTCCCGACCTCGGCCGTGTTCCGCGCCGGAGTGACCGCCTACACCAAGATC
TTCTCCAACACTTACGCCGCCGACAATGTGCGCATGAACAATGTGCTGCCCGGCTGGATCGACAGCCTGCCGACCGTCGA
AGAGCGCCGCGACAACGTGCCGATGCAGCGCTACGGCACATCAGAGGAGGTCGCCGCGACGATTGCGTTCCTGGCTTCGG
AGGGGGCGGGCTATATCACCGGCCAGAACATCCGCGTGGATGGGGGGGTTATAAGGGCGCTGTGA

Upstream 100 bases:

>100_bases
AGGCATTCTGGTTCGAACCGCGCGGCAGAACCAGCTATATCACCGTTCAAATCCCGAAAACACCGCTTGCGGTGCCCGCC
AACCCTGAGAGGAAGACCCA

Downstream 100 bases:

>100_bases
GGCCTTGACAGGCTTGGGTTCCTCGCCCCCACGGAAGTGGGGGAGAGGTGGCCGCGAAGCGGCCGGAGAGGGGGCCTTCG
TAAAGCAAAGACATTGCTCA

Product: 3-oxoacyl-acyl carrier protein reductase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MSVEKVAVVVAGGSGMGAAAAKRLAADGFKVAILSSSGKGEALAKELGGLGVTGSNQSSDDLQRLADLTLERFGRIDVLV
NSGGHGPRAPILEITDEQWRTGMDVYLMNVIRPVRIVAPQMVKQKGGAIINISTAWVAEPNVMFPTSAVFRAGVTAYTKI
FSNTYAADNVRMNNVLPGWIDSLPTVEERRDNVPMQRYGTSEEVAATIAFLASEGAGYITGQNIRVDGGVIRAL

Sequences:

>Translated_234_residues
MSVEKVAVVVAGGSGMGAAAAKRLAADGFKVAILSSSGKGEALAKELGGLGVTGSNQSSDDLQRLADLTLERFGRIDVLV
NSGGHGPRAPILEITDEQWRTGMDVYLMNVIRPVRIVAPQMVKQKGGAIINISTAWVAEPNVMFPTSAVFRAGVTAYTKI
FSNTYAADNVRMNNVLPGWIDSLPTVEERRDNVPMQRYGTSEEVAATIAFLASEGAGYITGQNIRVDGGVIRAL
>Mature_233_residues
SVEKVAVVVAGGSGMGAAAAKRLAADGFKVAILSSSGKGEALAKELGGLGVTGSNQSSDDLQRLADLTLERFGRIDVLVN
SGGHGPRAPILEITDEQWRTGMDVYLMNVIRPVRIVAPQMVKQKGGAIINISTAWVAEPNVMFPTSAVFRAGVTAYTKIF
SNTYAADNVRMNNVLPGWIDSLPTVEERRDNVPMQRYGTSEEVAATIAFLASEGAGYITGQNIRVDGGVIRAL

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=242, Percent_Identity=30.9917355371901, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI19923817, Length=250, Percent_Identity=30, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI40254992, Length=235, Percent_Identity=25.9574468085106, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI5031737, Length=243, Percent_Identity=32.0987654320988, Blast_Score=84, Evalue=8e-17,
Organism=Homo sapiens, GI126723750, Length=245, Percent_Identity=27.3469387755102, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI10190704, Length=243, Percent_Identity=25.5144032921811, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI15277342, Length=248, Percent_Identity=29.0322580645161, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI66933014, Length=172, Percent_Identity=28.4883720930233, Blast_Score=78, Evalue=5e-15,
Organism=Homo sapiens, GI59889578, Length=205, Percent_Identity=31.219512195122, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI4758504, Length=248, Percent_Identity=27.8225806451613, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI126723191, Length=176, Percent_Identity=28.4090909090909, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI4503301, Length=167, Percent_Identity=29.3413173652695, Blast_Score=64, Evalue=1e-10,
Organism=Escherichia coli, GI1788459, Length=248, Percent_Identity=33.4677419354839, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1787335, Length=236, Percent_Identity=30.5084745762712, Blast_Score=97, Evalue=6e-22,
Organism=Escherichia coli, GI1789208, Length=239, Percent_Identity=29.2887029288703, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI87082160, Length=245, Percent_Identity=26.1224489795918, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI87082100, Length=248, Percent_Identity=28.2258064516129, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787905, Length=245, Percent_Identity=26.1224489795918, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1790717, Length=170, Percent_Identity=27.0588235294118, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=27.7551020408163, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1789057, Length=262, Percent_Identity=27.8625954198473, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1786812, Length=238, Percent_Identity=26.0504201680672, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17561402, Length=248, Percent_Identity=33.4677419354839, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI71994604, Length=251, Percent_Identity=31.4741035856574, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17560676, Length=243, Percent_Identity=27.1604938271605, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17562910, Length=262, Percent_Identity=30.9160305343511, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI71994600, Length=250, Percent_Identity=28.4, Blast_Score=97, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17555706, Length=245, Percent_Identity=32.2448979591837, Blast_Score=97, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI25147288, Length=241, Percent_Identity=30.2904564315353, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17544670, Length=264, Percent_Identity=27.6515151515151, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17560332, Length=265, Percent_Identity=29.0566037735849, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17538480, Length=264, Percent_Identity=28.4090909090909, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17551412, Length=270, Percent_Identity=28.5185185185185, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17562906, Length=265, Percent_Identity=29.0566037735849, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17559104, Length=266, Percent_Identity=27.4436090225564, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17562908, Length=265, Percent_Identity=29.0566037735849, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI193204405, Length=274, Percent_Identity=28.4671532846715, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17538182, Length=246, Percent_Identity=28.4552845528455, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17562904, Length=262, Percent_Identity=27.8625954198473, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17538486, Length=270, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17560150, Length=258, Percent_Identity=28.2945736434109, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI72000259, Length=256, Percent_Identity=29.296875, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17536025, Length=253, Percent_Identity=27.2727272727273, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17508651, Length=254, Percent_Identity=27.5590551181102, Blast_Score=63, Evalue=1e-10,
Organism=Drosophila melanogaster, GI21355319, Length=242, Percent_Identity=30.9917355371901, Blast_Score=100, Evalue=6e-22,
Organism=Drosophila melanogaster, GI23397609, Length=243, Percent_Identity=32.5102880658436, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24639444, Length=243, Percent_Identity=31.6872427983539, Blast_Score=91, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24644339, Length=250, Percent_Identity=30.4, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI28571526, Length=251, Percent_Identity=31.4741035856574, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21357041, Length=248, Percent_Identity=31.0483870967742, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 24753; Mature: 24621

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVEKVAVVVAGGSGMGAAAAKRLAADGFKVAILSSSGKGEALAKELGGLGVTGSNQSSD
CCCCEEEEEEECCCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCHH
DLQRLADLTLERFGRIDVLVNSGGHGPRAPILEITDEQWRTGMDVYLMNVIRPVRIVAPQ
HHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEECCHHHHCCHHHHHHHHHHHHHHHHHH
MVKQKGGAIINISTAWVAEPNVMFPTSAVFRAGVTAYTKIFSNTYAADNVRMNNVLPGWI
HHHHCCCEEEEEEEEEEECCCEECCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHH
DSLPTVEERRDNVPMQRYGTSEEVAATIAFLASEGAGYITGQNIRVDGGVIRAL
HCCCCHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCEEECCEEEECCCEEECC
>Mature Secondary Structure 
SVEKVAVVVAGGSGMGAAAAKRLAADGFKVAILSSSGKGEALAKELGGLGVTGSNQSSD
CCCEEEEEEECCCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCHH
DLQRLADLTLERFGRIDVLVNSGGHGPRAPILEITDEQWRTGMDVYLMNVIRPVRIVAPQ
HHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEECCHHHHCCHHHHHHHHHHHHHHHHHH
MVKQKGGAIINISTAWVAEPNVMFPTSAVFRAGVTAYTKIFSNTYAADNVRMNNVLPGWI
HHHHCCCEEEEEEEEEEECCCEECCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHH
DSLPTVEERRDNVPMQRYGTSEEVAATIAFLASEGAGYITGQNIRVDGGVIRAL
HCCCCHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCEEECCEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA