Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13471759

Identifier: 13471759

GI number: 13471759

Start: 1518860

End: 1520161

Strand: Reverse

Name: 13471759

Synonym: mll1835

Alternate gene names: NA

Gene position: 1520161-1518860 (Counterclockwise)

Preceding gene: 13471763

Following gene: 13471757

Centisome position: 21.61

GC content: 54.99

Gene sequence:

>1302_bases
ATGACGACCGACGAACCTATCGGACTTCAATTCAGATCCCGCGAGGCGTTAACCGAAAGCATTGATAGCGACCCGTCCAG
CTATGACGCCTGGGAAGAGTTGATCAATCTGGAGGCTTGGGAAGGCAATGTAGACACTGCCGTTTCTGCCCTTCTGCGAG
CAGTTGATGCGGTGTCCGACAGGGACCGGCTTTGGCAAATGGTCGATGAATTTTCGTGGGTCTATGGAATTGGACGGGAG
CCGATCATCGTTTTGTACGAGCGATGGAAAATTGATACGCATCAAAGCGCTTCAACAAGCATTTTCTTCGCGAAGCAATT
TAAGGAGTTCGATCTTCTGGAGTTCAGCAACGAATGCATCTCGCGCGCGGAGCGCGAAGTGCACACTGCACAGGACTGCG
TCTGGCTTGCGGAGTATATGCGCGAAAATGGGGAAGCACCGCGAGCCCTGGCCGTGTTGCAGCGTGGGATAGTCGCTCAC
CCGCGCGACGCAACGATATGGGATTGCCTCGCCGACACACATCGCCTCGGGAAATCGGCGCGCGAACTGGCGGAAGCGAG
CTATCAGTCGTTCAAGCAATGCCGCCTCGACGGAGTCACGGAAAAAGCCGATGTCGCCTGGGCATCCTTCGGCTGGATGC
TCGATACGGTTGGCAACTATTTCTCGGCCGAGGAAGCCTATCGCCAGGCGATGGAAATTGATCCACGCTATAGCTGGCCC
ATAGGGAAGTTGTCAGGATTGCTGCGTCGTCGTTTCGGCCGCTACCACGAGGCCGAAAGCCTTGCGCAACGATGCGTTGA
GATCGATCCTGACGATGCCTGGTCGTGGTTCAATCTCGGTTTTCTTCATCATCATCATCTGAACCGCTTTGGCGATGCCA
AGGCGGCGTATTCACGGGCAATCGAACTCAAGCCGGACTATGTCAAGGTTTGGGAGAATCTTGTGGCGCTGATGGCCTTC
GAAACAGATACGCCAGCGGAGACTCAAGAGACTTTTGACAAGCTATTCGAGCTGAGCGGCATTTCGGCTTTTGCCTATAA
TCAGTACGGCATCTTTCTCCGCGAAATGACGGACCGATATGATGAATCGGAGAAAGCTCTGCTGCATGCGATCGACATGG
AGCCAGCCGAATGGTCCCACAGGTTGGCGTTGGCAGTCTTGTATGAAAAGCGCATGCTCAGATTCGGGGACGCTCGGAAA
CGCCTGCTTGAAGCAAAGGAGCGCGGCGCTCCGGTCGACAACATAGACTACCGCCTGGCCTTGATTGCGCAGCGTCGGCG
GCCCTTGAAAGTTATCAAGTAA

Upstream 100 bases:

>100_bases
GCTGTGCGTTGCTCATATGGGTTGGCGATTGTAGATATACTGTCTAGTGTCCAGCTTTAGTCCGACATCGTTGTTTTCGG
TAACACTTCAGCAGCAGCCA

Downstream 100 bases:

>100_bases
GGAACGGTATGAAGCGTCTACTGTATTCGATCTTTGCCGCGCTTTTCGTGACATCAGCGCTTGCTCACGTTCCACCAACC
GCCCCGGCTTACGCGAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MTTDEPIGLQFRSREALTESIDSDPSSYDAWEELINLEAWEGNVDTAVSALLRAVDAVSDRDRLWQMVDEFSWVYGIGRE
PIIVLYERWKIDTHQSASTSIFFAKQFKEFDLLEFSNECISRAEREVHTAQDCVWLAEYMRENGEAPRALAVLQRGIVAH
PRDATIWDCLADTHRLGKSARELAEASYQSFKQCRLDGVTEKADVAWASFGWMLDTVGNYFSAEEAYRQAMEIDPRYSWP
IGKLSGLLRRRFGRYHEAESLAQRCVEIDPDDAWSWFNLGFLHHHHLNRFGDAKAAYSRAIELKPDYVKVWENLVALMAF
ETDTPAETQETFDKLFELSGISAFAYNQYGIFLREMTDRYDESEKALLHAIDMEPAEWSHRLALAVLYEKRMLRFGDARK
RLLEAKERGAPVDNIDYRLALIAQRRRPLKVIK

Sequences:

>Translated_433_residues
MTTDEPIGLQFRSREALTESIDSDPSSYDAWEELINLEAWEGNVDTAVSALLRAVDAVSDRDRLWQMVDEFSWVYGIGRE
PIIVLYERWKIDTHQSASTSIFFAKQFKEFDLLEFSNECISRAEREVHTAQDCVWLAEYMRENGEAPRALAVLQRGIVAH
PRDATIWDCLADTHRLGKSARELAEASYQSFKQCRLDGVTEKADVAWASFGWMLDTVGNYFSAEEAYRQAMEIDPRYSWP
IGKLSGLLRRRFGRYHEAESLAQRCVEIDPDDAWSWFNLGFLHHHHLNRFGDAKAAYSRAIELKPDYVKVWENLVALMAF
ETDTPAETQETFDKLFELSGISAFAYNQYGIFLREMTDRYDESEKALLHAIDMEPAEWSHRLALAVLYEKRMLRFGDARK
RLLEAKERGAPVDNIDYRLALIAQRRRPLKVIK
>Mature_432_residues
TTDEPIGLQFRSREALTESIDSDPSSYDAWEELINLEAWEGNVDTAVSALLRAVDAVSDRDRLWQMVDEFSWVYGIGREP
IIVLYERWKIDTHQSASTSIFFAKQFKEFDLLEFSNECISRAEREVHTAQDCVWLAEYMRENGEAPRALAVLQRGIVAHP
RDATIWDCLADTHRLGKSARELAEASYQSFKQCRLDGVTEKADVAWASFGWMLDTVGNYFSAEEAYRQAMEIDPRYSWPI
GKLSGLLRRRFGRYHEAESLAQRCVEIDPDDAWSWFNLGFLHHHHLNRFGDAKAAYSRAIELKPDYVKVWENLVALMAFE
TDTPAETQETFDKLFELSGISAFAYNQYGIFLREMTDRYDESEKALLHAIDMEPAEWSHRLALAVLYEKRMLRFGDARKR
LLEAKERGAPVDNIDYRLALIAQRRRPLKVIK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50135; Mature: 50004

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTDEPIGLQFRSREALTESIDSDPSSYDAWEELINLEAWEGNVDTAVSALLRAVDAVSD
CCCCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCH
RDRLWQMVDEFSWVYGIGREPIIVLYERWKIDTHQSASTSIFFAKQFKEFDLLEFSNECI
HHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SRAEREVHTAQDCVWLAEYMRENGEAPRALAVLQRGIVAHPRDATIWDCLADTHRLGKSA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
RELAEASYQSFKQCRLDGVTEKADVAWASFGWMLDTVGNYFSAEEAYRQAMEIDPRYSWP
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
IGKLSGLLRRRFGRYHEAESLAQRCVEIDPDDAWSWFNLGFLHHHHLNRFGDAKAAYSRA
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
IELKPDYVKVWENLVALMAFETDTPAETQETFDKLFELSGISAFAYNQYGIFLREMTDRY
HCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHH
DESEKALLHAIDMEPAEWSHRLALAVLYEKRMLRFGDARKRLLEAKERGAPVDNIDYRLA
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LIAQRRRPLKVIK
HHHHCCCCCCCCC
>Mature Secondary Structure 
TTDEPIGLQFRSREALTESIDSDPSSYDAWEELINLEAWEGNVDTAVSALLRAVDAVSD
CCCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCH
RDRLWQMVDEFSWVYGIGREPIIVLYERWKIDTHQSASTSIFFAKQFKEFDLLEFSNECI
HHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SRAEREVHTAQDCVWLAEYMRENGEAPRALAVLQRGIVAHPRDATIWDCLADTHRLGKSA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
RELAEASYQSFKQCRLDGVTEKADVAWASFGWMLDTVGNYFSAEEAYRQAMEIDPRYSWP
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
IGKLSGLLRRRFGRYHEAESLAQRCVEIDPDDAWSWFNLGFLHHHHLNRFGDAKAAYSRA
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
IELKPDYVKVWENLVALMAFETDTPAETQETFDKLFELSGISAFAYNQYGIFLREMTDRY
HCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHH
DESEKALLHAIDMEPAEWSHRLALAVLYEKRMLRFGDARKRLLEAKERGAPVDNIDYRLA
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LIAQRRRPLKVIK
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA