| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13471734
Identifier: 13471734
GI number: 13471734
Start: 1491185
End: 1491403
Strand: Reverse
Name: 13471734
Synonym: msl1803
Alternate gene names: NA
Gene position: 1491403-1491185 (Counterclockwise)
Preceding gene: 13471736
Following gene: 13471731
Centisome position: 21.2
GC content: 57.08
Gene sequence:
>219_bases ATGCCTTCACCGCCATTTTCCAGAGGGAAGCATCCGGCTGATCATAACCCAAGCAACGGCAAAATTCCAACGGCCGCAGG CGCTGCGCATCGTCGGCGTCAGAACCTCATGTACAGCGAGGGCTTCAGATCAGGCGGCAAAAACGAGCCGGCGCTGATGT CGGCCGAACATGTTTCGGTATTCGCAATTGAGTTTGACGATCGACAGCACGCGCCCTGA
Upstream 100 bases:
>100_bases CCGCTCGGCGTGGGCCTGGGCGAGCCAAAGTGCGCTGAACGCCGCCAGGAACGCGAGCAGGAGGCCTTGCCTCAAATAGC TGGAAAAGCTCCTTCGCAAC
Downstream 100 bases:
>100_bases TCGCGGCTCCAAGCGCTACCGATCCACCATCGCCATCCCCCGTTCGCCGTAGCGCGGGCCGGAGATCTTTTCCGGCGCCA GCGCCTCGTCCAGCGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MPSPPFSRGKHPADHNPSNGKIPTAAGAAHRRRQNLMYSEGFRSGGKNEPALMSAEHVSVFAIEFDDRQHAP
Sequences:
>Translated_72_residues MPSPPFSRGKHPADHNPSNGKIPTAAGAAHRRRQNLMYSEGFRSGGKNEPALMSAEHVSVFAIEFDDRQHAP >Mature_71_residues PSPPFSRGKHPADHNPSNGKIPTAAGAAHRRRQNLMYSEGFRSGGKNEPALMSAEHVSVFAIEFDDRQHAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7866; Mature: 7735
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPPFSRGKHPADHNPSNGKIPTAAGAAHRRRQNLMYSEGFRSGGKNEPALMSAEHVSV CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCEEE FAIEFDDRQHAP EEEEECCCCCCC >Mature Secondary Structure PSPPFSRGKHPADHNPSNGKIPTAAGAAHRRRQNLMYSEGFRSGGKNEPALMSAEHVSV CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCEEE FAIEFDDRQHAP EEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA