| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13471736
Identifier: 13471736
GI number: 13471736
Start: 1493624
End: 1494118
Strand: Reverse
Name: 13471736
Synonym: mll1805
Alternate gene names: NA
Gene position: 1494118-1493624 (Counterclockwise)
Preceding gene: 13471738
Following gene: 13471734
Centisome position: 21.24
GC content: 57.98
Gene sequence:
>495_bases ATGCGCCGCGCGCCGTGTGATGTCGGCACATTTGTCGTCGAGCTGCAGCCTACGCAACTGTGGCGAGAAAGCTCCGCAAC GGCGGCACACTCCGGTTACATGCCTTCGTCAAACTCGGTTGGCAGTCCGTCAGTGAGCAAGGCTGGTACACTCGCTCGCA TTCCCCTTGACTGCGGGGCAGTAGGCGTATTTTCTTATTACTGCGTGACGTTGAAAGTCCTGGTGCGATGCCGCGGCCGT TTTTCGGCCAAGGCTGGAGCGACGCAAATGGCAAGATTGCTGCTGGCAAAGATGGCTTCGGCCGCCGCCTTGGTTTCGAC GTCAGTCATGCTGAGCGGATGCTGGACGATTGCAGGACGGCCCATCATCTGCGATTTCGGCTTTTCGCTGAAGGATGGAC GATGCGCCAAGGTAACCAAGGTCACCAATGTCACCAAGGTAAGCACGCCTCGACGCGACAAATCGAGCCCGAAGCACGGC GATTCTCACTATTGA
Upstream 100 bases:
>100_bases CGAAGGAAGAGCTCCTTGAGCTTTCTCATCTGGATGGCGCTCACATGAGGGATGCAGGAATCTACCAACGGCGATTTGTA GGTGTCAAACGTTCAGGTCG
Downstream 100 bases:
>100_bases TCCATCGCCCTGTTCGGCACCAATTAGCGGAGCGGTAATCGTTTCGAATATCGCGCAACGCCTATCACGCGTTACGGACC ATTTTGTTTGATGTATAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MRRAPCDVGTFVVELQPTQLWRESSATAAHSGYMPSSNSVGSPSVSKAGTLARIPLDCGAVGVFSYYCVTLKVLVRCRGR FSAKAGATQMARLLLAKMASAAALVSTSVMLSGCWTIAGRPIICDFGFSLKDGRCAKVTKVTNVTKVSTPRRDKSSPKHG DSHY
Sequences:
>Translated_164_residues MRRAPCDVGTFVVELQPTQLWRESSATAAHSGYMPSSNSVGSPSVSKAGTLARIPLDCGAVGVFSYYCVTLKVLVRCRGR FSAKAGATQMARLLLAKMASAAALVSTSVMLSGCWTIAGRPIICDFGFSLKDGRCAKVTKVTNVTKVSTPRRDKSSPKHG DSHY >Mature_164_residues MRRAPCDVGTFVVELQPTQLWRESSATAAHSGYMPSSNSVGSPSVSKAGTLARIPLDCGAVGVFSYYCVTLKVLVRCRGR FSAKAGATQMARLLLAKMASAAALVSTSVMLSGCWTIAGRPIICDFGFSLKDGRCAKVTKVTNVTKVSTPRRDKSSPKHG DSHY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17435; Mature: 17435
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRAPCDVGTFVVELQPTQLWRESSATAAHSGYMPSSNSVGSPSVSKAGTLARIPLDCGA CCCCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCH VGVFSYYCVTLKVLVRCRGRFSAKAGATQMARLLLAKMASAAALVSTSVMLSGCWTIAGR HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PIICDFGFSLKDGRCAKVTKVTNVTKVSTPRRDKSSPKHGDSHY EEEEECCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRAPCDVGTFVVELQPTQLWRESSATAAHSGYMPSSNSVGSPSVSKAGTLARIPLDCGA CCCCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCH VGVFSYYCVTLKVLVRCRGRFSAKAGATQMARLLLAKMASAAALVSTSVMLSGCWTIAGR HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PIICDFGFSLKDGRCAKVTKVTNVTKVSTPRRDKSSPKHGDSHY EEEEECCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA