| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471727
Identifier: 13471727
GI number: 13471727
Start: 1485021
End: 1485467
Strand: Reverse
Name: 13471727
Synonym: mll1793
Alternate gene names: NA
Gene position: 1485467-1485021 (Counterclockwise)
Preceding gene: 13471730
Following gene: 13471726
Centisome position: 21.11
GC content: 57.72
Gene sequence:
>447_bases ATGATCCCTTTTGTTTGGGGGATATGCATGCCGACACTAAGAAATCCGCAATATCGAGCCTTTGCGCGACGCAAGCTTTA TAGGCGTCAGGACGGCAAATGCTTCTACTGTCATCGCGACCTCACCACCAAGAAGACCGGCGAGCTAGCACTGACAATCG AGCATCGGAAGGCAAAGATGAAGGGCGGGACGGACGATCTCAAAAACTTGGTCGCCGCATGCTGGCATTGCAATCACCAC CGCGGCGAACAAATGAACGCCACCAAGCAGCGGAAAGAAGCCAAGGCTCTGAGCCGGCAGCGCCGAATGCTAGCCCGCGA TTGCCGTTCCAAGGCCGACTCCCAAGCCGATGGCAAGGCCCATGAGCAGCTTGCCAGCAAAGTCGAGGGCAATGGCGCGA ACAGGACTCCAAGCGTCCACACGGCGCGCTCTGAGGGCCTTGGATAG
Upstream 100 bases:
>100_bases ATGTCCAAAATGCCTTGTCCTGTCCACAGGGATCACTTTGCCGTGGCCGGCGGCTTAGTCAAGCATCCTCTAATGCAAGG ATTGACGTTCTTACGCGGAC
Downstream 100 bases:
>100_bases GTCATCGAAGATCGTGTCCATGGGCAGATTCTAGATCCAAACCCCGAATGTGTGAATCCCCTGTTTGTTCCGCTTGCGAG AGGCGCCCATGTGGAGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MIPFVWGICMPTLRNPQYRAFARRKLYRRQDGKCFYCHRDLTTKKTGELALTIEHRKAKMKGGTDDLKNLVAACWHCNHH RGEQMNATKQRKEAKALSRQRRMLARDCRSKADSQADGKAHEQLASKVEGNGANRTPSVHTARSEGLG
Sequences:
>Translated_148_residues MIPFVWGICMPTLRNPQYRAFARRKLYRRQDGKCFYCHRDLTTKKTGELALTIEHRKAKMKGGTDDLKNLVAACWHCNHH RGEQMNATKQRKEAKALSRQRRMLARDCRSKADSQADGKAHEQLASKVEGNGANRTPSVHTARSEGLG >Mature_148_residues MIPFVWGICMPTLRNPQYRAFARRKLYRRQDGKCFYCHRDLTTKKTGELALTIEHRKAKMKGGTDDLKNLVAACWHCNHH RGEQMNATKQRKEAKALSRQRRMLARDCRSKADSQADGKAHEQLASKVEGNGANRTPSVHTARSEGLG
Specific function: Unknown
COG id: COG1403
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16864; Mature: 16864
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPFVWGICMPTLRNPQYRAFARRKLYRRQDGKCFYCHRDLTTKKTGELALTIEHRKAKM CCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEHHHHHHC KGGTDDLKNLVAACWHCNHHRGEQMNATKQRKEAKALSRQRRMLARDCRSKADSQADGKA CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH HEQLASKVEGNGANRTPSVHTARSEGLG HHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIPFVWGICMPTLRNPQYRAFARRKLYRRQDGKCFYCHRDLTTKKTGELALTIEHRKAKM CCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEHHHHHHC KGGTDDLKNLVAACWHCNHHRGEQMNATKQRKEAKALSRQRRMLARDCRSKADSQADGKA CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH HEQLASKVEGNGANRTPSVHTARSEGLG HHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA