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The map label for this gene is atoS [C]

Identifier: 13471730

GI number: 13471730

Start: 1487928

End: 1489082

Strand: Reverse

Name: atoS [C]

Synonym: mll1798

Alternate gene names: 13471730

Gene position: 1489082-1487928 (Counterclockwise)

Preceding gene: 13471731

Following gene: 13471727

Centisome position: 21.16

GC content: 63.2

Gene sequence:

>1155_bases
ATGCCTATGAGCGAAATCGTGGCGGCAACGGCGGACATCGCAACAAACAACGAAAAACAGAGCGCGACCGCCGACGCACG
CCTCGCGGCCATCGTCGATTCATCTTTCGATGCCATCATCAGCAAGGATTTGACCAGCATCATCACGAGCTGGAACCTGG
CGGCCGAACGCATGTTCGGCTACACCGCCGAGGAAGCCATCGGCCAGTCGATCCTCATGCTCATCCCCGATCACCTCAAG
AGCGAGGAGACCGAGATCATCAGCAGGGTTCGCAGTGGCCACCGCGTGGCGAGTTATGAGACGACGCGAAGGCGCAAGGA
CGGCACGCTTATCTCCGTCTCGCTGACGGTTTCGCCGATCAAGAACGCCCTGGGCGAGATCGTCGGCGCCTCGAAAATCG
CCCGCGACATTTCCGCCGCCAAGGAGAGCGAGCGCCGCATCAGGCTCTTGATGCGGGAGGTCAATCATCGCGTCAAGAAC
CAGTTCGCGGTCATCCTGTCGATGGTCAGGGAGACGAGCAAGCGCTCGAGCGACCCGCAGGAGTTCGAGGAACTGATCCG
CGCCCGCATCATGGCGCTGTCGCGCTCGCATGATCTGCTCGTCACCTCGGAGTGGGCCGGCGCCAGCCTGTTCGACCTGA
TCCAGGAACATCTGAAGCCTTTCGGCCGCGAGGAGCAGATCCTGCTCTCCGGCCCGGTCCTGACGCTGCAGTCGAATGCG
GTGCAGAATCTCGGCATGGCCTTCCACGAGCTCGGCACGAATTCCTCCAAATATGGCGCGCTTGGCAGCGAAGACGGCCA
GGTCGAGATCACCTGGACAATCGGCTCAAGCGCCCAGGACTTGGGTACCAAAGACTTGGGTGCCAAAGACTTGGGCACCA
AGAGTGTCGGTGCGTCGGGCGGACGCGACTTCCAGCTGCTTTGGACCGAGACTTCCACGCCCCGTTCGGACGACAGTCGC
GAGGAGAACGCGCGCAAGGGGTTCGGCACAGTTGTCCTGCAGCGGGTGGCGCCGCAGTCGCTGGGCGGCTCGGCTCAACT
GGAGCGCTCGCCCGGCCGTCTCAGCTGGCGCCTCAGTGCGCCGCTGGCATCGATCATCGTGCCGCAAGCCGGCGTCGAGG
CCGATGATAGCGCAGCGCTGGGCTTCGGCATCTGA

Upstream 100 bases:

>100_bases
ACGAGCGACCGGCCTTCGAAGTGAAGCCGGTTTCGCCCGTGGCGCGCCGTATGCGAATTGCGCCCGGGGAGATTGCCTTG
ATCCGCTTGCGCGCTACCTC

Downstream 100 bases:

>100_bases
ACGTCCCGTATGGCCCGTAAAAAGGGATTGGCGTCATGTCCAACCGGGGCGGCGGGTCCTCCGCCGCCCCGGCTTGCCGG
TCACCGGTGATGAGGGAGAT

Product: response sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MPMSEIVAATADIATNNEKQSATADARLAAIVDSSFDAIISKDLTSIITSWNLAAERMFGYTAEEAIGQSILMLIPDHLK
SEETEIISRVRSGHRVASYETTRRRKDGTLISVSLTVSPIKNALGEIVGASKIARDISAAKESERRIRLLMREVNHRVKN
QFAVILSMVRETSKRSSDPQEFEELIRARIMALSRSHDLLVTSEWAGASLFDLIQEHLKPFGREEQILLSGPVLTLQSNA
VQNLGMAFHELGTNSSKYGALGSEDGQVEITWTIGSSAQDLGTKDLGAKDLGTKSVGASGGRDFQLLWTETSTPRSDDSR
EENARKGFGTVVLQRVAPQSLGGSAQLERSPGRLSWRLSAPLASIIVPQAGVEADDSAALGFGI

Sequences:

>Translated_384_residues
MPMSEIVAATADIATNNEKQSATADARLAAIVDSSFDAIISKDLTSIITSWNLAAERMFGYTAEEAIGQSILMLIPDHLK
SEETEIISRVRSGHRVASYETTRRRKDGTLISVSLTVSPIKNALGEIVGASKIARDISAAKESERRIRLLMREVNHRVKN
QFAVILSMVRETSKRSSDPQEFEELIRARIMALSRSHDLLVTSEWAGASLFDLIQEHLKPFGREEQILLSGPVLTLQSNA
VQNLGMAFHELGTNSSKYGALGSEDGQVEITWTIGSSAQDLGTKDLGAKDLGTKSVGASGGRDFQLLWTETSTPRSDDSR
EENARKGFGTVVLQRVAPQSLGGSAQLERSPGRLSWRLSAPLASIIVPQAGVEADDSAALGFGI
>Mature_383_residues
PMSEIVAATADIATNNEKQSATADARLAAIVDSSFDAIISKDLTSIITSWNLAAERMFGYTAEEAIGQSILMLIPDHLKS
EETEIISRVRSGHRVASYETTRRRKDGTLISVSLTVSPIKNALGEIVGASKIARDISAAKESERRIRLLMREVNHRVKNQ
FAVILSMVRETSKRSSDPQEFEELIRARIMALSRSHDLLVTSEWAGASLFDLIQEHLKPFGREEQILLSGPVLTLQSNAV
QNLGMAFHELGTNSSKYGALGSEDGQVEITWTIGSSAQDLGTKDLGAKDLGTKSVGASGGRDFQLLWTETSTPRSDDSRE
ENARKGFGTVVLQRVAPQSLGGSAQLERSPGRLSWRLSAPLASIIVPQAGVEADDSAALGFGI

Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=205, Percent_Identity=29.7560975609756, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR013655
- InterPro:   IPR011102 [H]

Pfam domain/function: PF07536 HWE_HK; PF00989 PAS; PF08447 PAS_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 41548; Mature: 41417

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS50112 PAS ; PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMSEIVAATADIATNNEKQSATADARLAAIVDSSFDAIISKDLTSIITSWNLAAERMFG
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHC
YTAEEAIGQSILMLIPDHLKSEETEIISRVRSGHRVASYETTRRRKDGTLISVSLTVSPI
CCHHHHHCCCEEEECCHHHCCHHHHHHHHHHCCCEEEHHHHHHHCCCCCEEEEEEEHHHH
KNALGEIVGASKIARDISAAKESERRIRLLMREVNHRVKNQFAVILSMVRETSKRSSDPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EFEELIRARIMALSRSHDLLVTSEWAGASLFDLIQEHLKPFGREEQILLSGPVLTLQSNA
HHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCEEEECHHH
VQNLGMAFHELGTNSSKYGALGSEDGQVEITWTIGSSAQDLGTKDLGAKDLGTKSVGASG
HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCHHHCCCCCCCCCCCCCCCCCCCC
GRDFQLLWTETSTPRSDDSREENARKGFGTVVLQRVAPQSLGGSAQLERSPGRLSWRLSA
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCCCEECCCCCCEEEEECC
PLASIIVPQAGVEADDSAALGFGI
CHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PMSEIVAATADIATNNEKQSATADARLAAIVDSSFDAIISKDLTSIITSWNLAAERMFG
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHC
YTAEEAIGQSILMLIPDHLKSEETEIISRVRSGHRVASYETTRRRKDGTLISVSLTVSPI
CCHHHHHCCCEEEECCHHHCCHHHHHHHHHHCCCEEEHHHHHHHCCCCCEEEEEEEHHHH
KNALGEIVGASKIARDISAAKESERRIRLLMREVNHRVKNQFAVILSMVRETSKRSSDPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EFEELIRARIMALSRSHDLLVTSEWAGASLFDLIQEHLKPFGREEQILLSGPVLTLQSNA
HHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCEEEECHHH
VQNLGMAFHELGTNSSKYGALGSEDGQVEITWTIGSSAQDLGTKDLGAKDLGTKSVGASG
HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCHHHCCCCCCCCCCCCCCCCCCCC
GRDFQLLWTETSTPRSDDSREENARKGFGTVVLQRVAPQSLGGSAQLERSPGRLSWRLSA
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCCCEECCCCCCEEEEECC
PLASIIVPQAGVEADDSAALGFGI
CHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA