| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471708
Identifier: 13471708
GI number: 13471708
Start: 1469936
End: 1471522
Strand: Reverse
Name: 13471708
Synonym: mll1762
Alternate gene names: NA
Gene position: 1471522-1469936 (Counterclockwise)
Preceding gene: 13471710
Following gene: 13471707
Centisome position: 20.91
GC content: 65.72
Gene sequence:
>1587_bases ATGTGGTTTAAGCGCCGCATGGTGGGAATAGACGACTCCATGGATGGTTGGGCGCCGGCGGGGCTGACTGCCGCCGGCCT CGAACCGTCATCGGTATGGCCAGGTCTGCTCCGCCATCCCTGGTATTTGCTGGCGCTTTTGTGCCTGGTGCAGATCCTGT GCTGGACGGTGGTGCCGGCACTGATCGATCCCGCCCCGCCCGGCGATGTGGTGGAAGGTTTCATGTGGGGCCGCGAATGG GTGCTGTTGACCTACAAGCACCCGCAGCTTCCGGGCTGGCTGCTCGAAACCAGCCATCTTCTGACCGGATCTTTCCGCTG GCCGCAATACATGCTTGCCCAGCTGACGATCTCGTCGACCTTCATCCTGGTCTATCTGCTGGCCCGCGACATGCTCGGGC AAAGCCGCGCGCTGGCCGCCGTGCTTTTGATGCCGTCGGTCTATTTCTTCGGCTGGCCGACCCCGCAATTCAATCATGAC TACGCGCAGATGCCGTTCTGGGCGGCCATCTGCTGGCTGCTCTGGCGCGCCGGCCGTGGCGGCGGGCCGGGCTGGTGGCT GGCGCTTGGACTGGTGTCGGGCGTCGGGCTCTATGCCAAGTTCTCCACCGGCCTGCTGCTTGCCTTCGGCGCGCTCTGGC TGTTGTATGACGCACGCGCGCGCATCCGGCTGGCGACGCCCTGGCCATGGCTCGGCCTTGCCGTTTTTCTCGCCGTTGCC GCGCCGCTGGCCATCGCGCTCTACCGTATCGATTTCCTGCCACTGACCTATTTCGCAGCCCGCGACCAATGGGTGACCGA AAACCGGGTGCGCCTCTACTACATCGGTGTCCAGATGGCCGGGCTCTCCGGCTTTCTTCTGGTGCTGACGATATCCGGGC TGCTGCGGCGCTCGCCCGCCCCGGAAGTGCCGGTCGAGCGCGGCATTCTGGTCTATCTCGTGTGGATGGGGCTTGGCCCG GCGACCCTGATCATGGTGGCCTCGTTGTTCACCGGCACAGGCGAGTCCTGGGGCGCGCCGATGTACAATCTCGTCGGTGT CACGGTGCTCGCCTTTCTCGGCCACCGGCTCGGCGCCATCGAGATGCGAAGGCTGGCGATCTGCGCGTTCCTCTGCATCC TCACCATGTCGAGCGCCTATGCGGCGCTCCGTTGGACGGGCTGCAATGTGCGGGGGCGCCTGGACGCCGTCTGCTGGCCG GCACAGCCGATCGCGGACGAGGCCGAGGCCGTCTGGCACGCCGCGGCGCCAGGCAGGCTCGACATTGTCGGCGGCGATAC CCAGGTGGCCATGCTGGCGGGCCTCAATGCCTATGACAAGCCGTCGATCTTCACCGATCTCGATACCCGGTTCGCGCCCT GGATCACCAGCCAGCGCTTGCGCGACCACGGCATGCTGATGGTTTGGCCGGGGCATGACGTGCCGCCGCAGTTGCGGACA TGGCTGGGCAACTTCCCGGTCAAGACCGTTCTTTTCAATTGGTCGCGCACGGCGCCGCCTGTGGCAATCAGCTTTGCCGC CATTCCGCCCGGCACGTTGTATCCGCCGCTTGCCGTCGACAGCCAGACCCTGCATCCGGGCAACTGA
Upstream 100 bases:
>100_bases AACGGAGCGCCGAAATTCCCGCCCAATCTTGGTCTTGCAATGGCCTGCAAGTATACTTTTTCGTAAGCTTTGACGTTGGG GCTGTTCGGCAAACCGGACG
Downstream 100 bases:
>100_bases AGCGGTTCGATCCCCGACCGCGTCGTGATATCGTTCGCTCATGGCCGCGTTGTTTCCGCGCGACTGGACGAAGCGGACGA CAATGCCCATCTATTGGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MWFKRRMVGIDDSMDGWAPAGLTAAGLEPSSVWPGLLRHPWYLLALLCLVQILCWTVVPALIDPAPPGDVVEGFMWGREW VLLTYKHPQLPGWLLETSHLLTGSFRWPQYMLAQLTISSTFILVYLLARDMLGQSRALAAVLLMPSVYFFGWPTPQFNHD YAQMPFWAAICWLLWRAGRGGGPGWWLALGLVSGVGLYAKFSTGLLLAFGALWLLYDARARIRLATPWPWLGLAVFLAVA APLAIALYRIDFLPLTYFAARDQWVTENRVRLYYIGVQMAGLSGFLLVLTISGLLRRSPAPEVPVERGILVYLVWMGLGP ATLIMVASLFTGTGESWGAPMYNLVGVTVLAFLGHRLGAIEMRRLAICAFLCILTMSSAYAALRWTGCNVRGRLDAVCWP AQPIADEAEAVWHAAAPGRLDIVGGDTQVAMLAGLNAYDKPSIFTDLDTRFAPWITSQRLRDHGMLMVWPGHDVPPQLRT WLGNFPVKTVLFNWSRTAPPVAISFAAIPPGTLYPPLAVDSQTLHPGN
Sequences:
>Translated_528_residues MWFKRRMVGIDDSMDGWAPAGLTAAGLEPSSVWPGLLRHPWYLLALLCLVQILCWTVVPALIDPAPPGDVVEGFMWGREW VLLTYKHPQLPGWLLETSHLLTGSFRWPQYMLAQLTISSTFILVYLLARDMLGQSRALAAVLLMPSVYFFGWPTPQFNHD YAQMPFWAAICWLLWRAGRGGGPGWWLALGLVSGVGLYAKFSTGLLLAFGALWLLYDARARIRLATPWPWLGLAVFLAVA APLAIALYRIDFLPLTYFAARDQWVTENRVRLYYIGVQMAGLSGFLLVLTISGLLRRSPAPEVPVERGILVYLVWMGLGP ATLIMVASLFTGTGESWGAPMYNLVGVTVLAFLGHRLGAIEMRRLAICAFLCILTMSSAYAALRWTGCNVRGRLDAVCWP AQPIADEAEAVWHAAAPGRLDIVGGDTQVAMLAGLNAYDKPSIFTDLDTRFAPWITSQRLRDHGMLMVWPGHDVPPQLRT WLGNFPVKTVLFNWSRTAPPVAISFAAIPPGTLYPPLAVDSQTLHPGN >Mature_528_residues MWFKRRMVGIDDSMDGWAPAGLTAAGLEPSSVWPGLLRHPWYLLALLCLVQILCWTVVPALIDPAPPGDVVEGFMWGREW VLLTYKHPQLPGWLLETSHLLTGSFRWPQYMLAQLTISSTFILVYLLARDMLGQSRALAAVLLMPSVYFFGWPTPQFNHD YAQMPFWAAICWLLWRAGRGGGPGWWLALGLVSGVGLYAKFSTGLLLAFGALWLLYDARARIRLATPWPWLGLAVFLAVA APLAIALYRIDFLPLTYFAARDQWVTENRVRLYYIGVQMAGLSGFLLVLTISGLLRRSPAPEVPVERGILVYLVWMGLGP ATLIMVASLFTGTGESWGAPMYNLVGVTVLAFLGHRLGAIEMRRLAICAFLCILTMSSAYAALRWTGCNVRGRLDAVCWP AQPIADEAEAVWHAAAPGRLDIVGGDTQVAMLAGLNAYDKPSIFTDLDTRFAPWITSQRLRDHGMLMVWPGHDVPPQLRT WLGNFPVKTVLFNWSRTAPPVAISFAAIPPGTLYPPLAVDSQTLHPGN
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58413; Mature: 58413
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWFKRRMVGIDDSMDGWAPAGLTAAGLEPSSVWPGLLRHPWYLLALLCLVQILCWTVVPA CCCCCCCCCCCCCCCCCCCCCCEECCCCCHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHH LIDPAPPGDVVEGFMWGREWVLLTYKHPQLPGWLLETSHLLTGSFRWPQYMLAQLTISST HCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCHHEECCHHHCCCCCCHHHHHHHHHHHHH FILVYLLARDMLGQSRALAAVLLMPSVYFFGWPTPQFNHDYAQMPFWAAICWLLWRAGRG HHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCCCCCHHCCCHHHHHHHHHHHCCCC GGPGWWLALGLVSGVGLYAKFSTGLLLAFGALWLLYDARARIRLATPWPWLGLAVFLAVA CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH APLAIALYRIDFLPLTYFAARDQWVTENRVRLYYIGVQMAGLSGFLLVLTISGLLRRSPA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCC PEVPVERGILVYLVWMGLGPATLIMVASLFTGTGESWGAPMYNLVGVTVLAFLGHRLGAI CCCCCCCCCEEEHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHH EMRRLAICAFLCILTMSSAYAALRWTGCNVRGRLDAVCWPAQPIADEAEAVWHAAAPGRL HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEECCCCCCCCHHHHHEECCCCCEE DIVGGDTQVAMLAGLNAYDKPSIFTDLDTRFAPWITSQRLRDHGMLMVWPGHDVPPQLRT EEECCCCEEEEEECCCCCCCCCCEECCCCHHCCCHHHHHHHHCCEEEEECCCCCCHHHHH WLGNFPVKTVLFNWSRTAPPVAISFAAIPPGTLYPPLAVDSQTLHPGN HHCCCCHHHEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MWFKRRMVGIDDSMDGWAPAGLTAAGLEPSSVWPGLLRHPWYLLALLCLVQILCWTVVPA CCCCCCCCCCCCCCCCCCCCCCEECCCCCHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHH LIDPAPPGDVVEGFMWGREWVLLTYKHPQLPGWLLETSHLLTGSFRWPQYMLAQLTISST HCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCHHEECCHHHCCCCCCHHHHHHHHHHHHH FILVYLLARDMLGQSRALAAVLLMPSVYFFGWPTPQFNHDYAQMPFWAAICWLLWRAGRG HHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCCCCCHHCCCHHHHHHHHHHHCCCC GGPGWWLALGLVSGVGLYAKFSTGLLLAFGALWLLYDARARIRLATPWPWLGLAVFLAVA CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH APLAIALYRIDFLPLTYFAARDQWVTENRVRLYYIGVQMAGLSGFLLVLTISGLLRRSPA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCC PEVPVERGILVYLVWMGLGPATLIMVASLFTGTGESWGAPMYNLVGVTVLAFLGHRLGAI CCCCCCCCCEEEHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHH EMRRLAICAFLCILTMSSAYAALRWTGCNVRGRLDAVCWPAQPIADEAEAVWHAAAPGRL HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEECCCCCCCCHHHHHEECCCCCEE DIVGGDTQVAMLAGLNAYDKPSIFTDLDTRFAPWITSQRLRDHGMLMVWPGHDVPPQLRT EEECCCCEEEEEECCCCCCCCCCEECCCCHHCCCHHHHHHHHCCEEEEECCCCCCHHHHH WLGNFPVKTVLFNWSRTAPPVAISFAAIPPGTLYPPLAVDSQTLHPGN HHCCCCHHHEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA