| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471540
Identifier: 13471540
GI number: 13471540
Start: 1281677
End: 1282273
Strand: Direct
Name: 13471540
Synonym: mlr1540
Alternate gene names: NA
Gene position: 1281677-1282273 (Clockwise)
Preceding gene: 13471534
Following gene: 13471558
Centisome position: 18.22
GC content: 67.84
Gene sequence:
>597_bases GTGTTCTCGCGCAGCAGCCTTTCGGCGGCGGCGCGTGCCTCGTCGGTGATCGTGGCCCCGGCCAGCATGCGGGCGATCTC TTCCTGCCGCGCCGGCCTGTCCATCTCGGCAATGCCCGTCGCCACACGGTCCGTGCTGCCCGATTTTGAGATCAGGAAAT GCGTCGCCGCGCGCGCCGCAACTTGCGGCGCATGGGTGACCGACAGTACCTGCACGCGCTTCGACAGACGCGCCAGCCTT TGGCCGATGGCATCCGCCACGGCGCCACCGACGCCGGTGTCGATTTCGTCGAAAACCAGCGTCGGCGCCGAGCCACGGTC GGCCAGCGCCACTTTCAGCGCCAAAAGGAAGCGCGACAGCTCGCCGCCCGACGCCACCTTCATCATCGGGCCTGGCCGCG TGCCGGGGTTGGTGCGCACCCAGAACTCGATCTGGTCGATGCCCTCTTCCATGCGGGTCTCGGCTTCGCTCTTCATCTCG ACGATGAAGGCGGCGCGTTCGAGTTTCAGCGCCGGCAACTCGGCCATGACAGCCTTGGTCAGGCCGACCGCCGCCGCGTG GCGAAGCGAGGAAAGCTGTGCCGCGGCGATGTCATAG
Upstream 100 bases:
>100_bases TTCGGAAAAGATCATTCCTGAACAGCAGGATGGAGCCATATCCTGACTCGCTGCCATATCCTGCCCCGTCAATGACGCTG GATGGCCTTACGCCGCGTTT
Downstream 100 bases:
>100_bases GCCTCGCGTGCCGCGGCGGCCTGCTTTTCCAGCCCGTGCAGGCGTTCCTCGCCGGCGTCGAGATCGGCGAGATCGGCAAC CATCGTGTCGCGCAATTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MFSRSSLSAAARASSVIVAPASMRAISSCRAGLSISAMPVATRSVLPDFEIRKCVAARAATCGAWVTDSTCTRFDRRASL WPMASATAPPTPVSISSKTSVGAEPRSASATFSAKRKRDSSPPDATFIIGPGRVPGLVRTQNSIWSMPSSMRVSASLFIS TMKAARSSFSAGNSAMTALVRPTAAAWRSEESCAAAMS
Sequences:
>Translated_198_residues MFSRSSLSAAARASSVIVAPASMRAISSCRAGLSISAMPVATRSVLPDFEIRKCVAARAATCGAWVTDSTCTRFDRRASL WPMASATAPPTPVSISSKTSVGAEPRSASATFSAKRKRDSSPPDATFIIGPGRVPGLVRTQNSIWSMPSSMRVSASLFIS TMKAARSSFSAGNSAMTALVRPTAAAWRSEESCAAAMS >Mature_198_residues MFSRSSLSAAARASSVIVAPASMRAISSCRAGLSISAMPVATRSVLPDFEIRKCVAARAATCGAWVTDSTCTRFDRRASL WPMASATAPPTPVSISSKTSVGAEPRSASATFSAKRKRDSSPPDATFIIGPGRVPGLVRTQNSIWSMPSSMRVSASLFIS TMKAARSSFSAGNSAMTALVRPTAAAWRSEESCAAAMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20589; Mature: 20589
Theoretical pI: Translated: 11.97; Mature: 11.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSRSSLSAAARASSVIVAPASMRAISSCRAGLSISAMPVATRSVLPDFEIRKCVAARAA CCCCHHHHHHHHCCEEEECCHHHHHHHHHHCCCEEEECCCHHHHHCCCHHHHHHHHHHHH TCGAWVTDSTCTRFDRRASLWPMASATAPPTPVSISSKTSVGAEPRSASATFSAKRKRDS HCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC SPPDATFIIGPGRVPGLVRTQNSIWSMPSSMRVSASLFISTMKAARSSFSAGNSAMTALV CCCCEEEEECCCCCCCEEEECHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH RPTAAAWRSEESCAAAMS CCHHHHHCCCCHHHHCCC >Mature Secondary Structure MFSRSSLSAAARASSVIVAPASMRAISSCRAGLSISAMPVATRSVLPDFEIRKCVAARAA CCCCHHHHHHHHCCEEEECCHHHHHHHHHHCCCEEEECCCHHHHHCCCHHHHHHHHHHHH TCGAWVTDSTCTRFDRRASLWPMASATAPPTPVSISSKTSVGAEPRSASATFSAKRKRDS HCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC SPPDATFIIGPGRVPGLVRTQNSIWSMPSSMRVSASLFISTMKAARSSFSAGNSAMTALV CCCCEEEEECCCCCCCEEEECHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH RPTAAAWRSEESCAAAMS CCHHHHHCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA